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Os02g0161000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Serine/threonine protein kinase-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.6 (0.0196) R2 : 0.504
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.1 (0.0511) R2dC : 0.506 R2C : 0.504
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0178 (0.0412) R2dN8 : 0.000261 R2N8 : -0.00173
σ : 0.369
deviance : 62.28
__
_____
C
peak time of C : 5.21
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
48.54 0.327 7.6 0.558 1.19 0.546 -0.395 1.1 -0.000547 5.26 43.65 1946 -- --
49.66 0.328 7.6 0.459 1.17 0.539 -0.508 -- -0.0162 5.26 41.42 1943 -- --
48.9 0.326 7.6 0.575 1.18 0.558 -- 1.27 0.00748 5.28 44.23 1945 -- --
50.33 0.33 7.61 0.448 1.2 0.525 -- -- -0.0323 5.25 40.46 1945 -- --
110.49 0.49 7.61 0.611 -- 0.644 -- 1.37 0.0471 -- 47 2775 -- --
55.62 0.35 7.59 0.479 1.09 -- -0.495 -- 0.0333 5.23 -- -- -- --
56.23 0.351 7.59 0.479 1.09 -- -- -- 0.0356 5.22 -- -- -- --
111.5 0.492 7.61 0.574 -- 0.639 -- -- 0.0622 -- 40.84 4183 -- --
55.77 0.348 7.62 -- 1.18 0.499 -- -- -0.0738 5.24 40 1944 -- --
118.53 0.509 7.61 0.517 -- -- -- -- 0.063 -- -- -- -- --
62.28 0.369 7.6 -- 1.1 -- -- -- -0.0178 5.21 -- -- -- --
120.1 0.51 7.62 -- -- 0.56 -- -- -0.0135 -- 40 4181 -- --
125.59 0.523 7.62 -- -- -- -- -- 0.00561 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 44.59 temperature 30.0 270 < th dose dependent rect. 1 4
2 45.12 temperature 30.0 270 < th dose dependent rect. 24 6
4 45.15 temperature 30.0 90 < th dose dependent rect. 3 4
12 46.04 temperature 25.0 270 < th dose independent rect. 1 4
14 46.29 wind 5.0 270 < th dose independent rect. 1 5
15 46.31 temperature 25.0 270 < th dose independent rect. 24 6
20 46.38 temperature 30.0 270 < th dose dependent rect. 3 1
25 46.64 wind 5.0 90 < th dose independent rect. 3 4
29 46.73 temperature 25.0 90 < th dose independent rect. 3 3
31 46.77 atmosphere 1015.0 270 < th dose independent rect. 6 19
32 46.78 wind 5.0 270 < th dose independent rect. 3 1
34 46.79 precipitation 0.1 270 < th dose independent rect. 1 5
36 46.79 precipitation 0.1 270 < th dose dependent rect. 1 5
39 46.83 precipitation 0.1 90 < th dose independent rect. 3 4
40 46.83 temperature 20.0 10 > th dose independent rect. 23 13
41 46.83 precipitation 0.1 90 < th dose dependent rect. 3 4
42 46.84 wind 5.0 10 < th dose independent rect. 3 4
49 46.91 temperature 15.0 90 > th dose independent rect. 7 20
52 46.93 atmosphere 1010.0 270 < th dose independent rect. 1 5
54 46.95 atmosphere 995.0 90 > th dose independent rect. 7 20
57 46.96 temperature 10.0 90 > th dose independent rect. 3 4
60 46.96 humidity 50.0 90 > th dose independent rect. 3 4
62 46.96 atmosphere 995.0 90 > th dose independent rect. 3 4
63 46.96 atmosphere 1010.0 90 < th dose independent rect. 3 4
65 46.96 radiation 30.0 90 < th dose independent rect. 3 4
73 46.99 wind 9.0 90 < th dose dependent rect. 3 4
76 47.00 temperature 10.0 270 > th dose independent rect. 1 5
79 47.00 humidity 50.0 270 > th dose independent rect. 1 5
82 47.00 atmosphere 995.0 270 > th dose independent rect. 1 5
84 47.00 radiation 20.0 270 < th dose independent rect. 1 5
89 47.01 radiation 1.0 270 < th dose dependent rect. 1 4
106 47.03 temperature 30.0 270 < th dose independent rect. 6 19
108 47.03 radiation 40.0 270 < th dose dependent rect. 1 5
116 47.05 radiation 1.0 270 < th dose independent rect. 1 4
120 47.06 radiation 40.0 90 < th dose dependent rect. 3 4
121 47.07 wind 1.0 270 > th dose independent rect. 1 4
123 47.07 atmosphere 1015.0 10 < th dose independent rect. 7 20
142 47.10 temperature 20.0 90 > th dose independent rect. 22 14
147 47.11 precipitation 0.1 270 < th dose independent rect. 6 19
150 47.11 precipitation 0.1 270 < th dose dependent rect. 6 19
161 47.18 precipitation 0.1 270 < th dose independent rect. 3 1
165 47.18 precipitation 0.1 270 < th dose dependent rect. 3 1
190 47.27 wind 1.0 270 > th dose independent rect. 3 1
193 47.27 wind 9.0 90 < th dose independent rect. 7 20
211 47.30 wind 9.0 270 < th dose dependent rect. 1 5
240 47.35 radiation 1.0 270 < th dose dependent rect. 1 10
253 47.38 wind 9.0 270 < th dose dependent rect. 3 1
257 47.39 temperature 30.0 10 < th dose independent rect. 7 20
269 47.43 wind 1.0 270 > th dose independent rect. 6 18
276 47.46 humidity 50.0 90 > th dose dependent rect. 3 4
278 47.47 temperature 10.0 270 > th dose independent rect. 3 1
281 47.47 humidity 50.0 270 > th dose independent rect. 3 1
284 47.47 atmosphere 995.0 270 > th dose independent rect. 3 1
285 47.47 atmosphere 1010.0 270 < th dose independent rect. 3 1
287 47.47 radiation 1.0 270 < th dose independent rect. 3 1
293 47.47 temperature 10.0 270 > th dose independent rect. 4 23
294 47.47 radiation 1.0 270 < th dose dependent rect. 3 1
338 47.59 precipitation 0.1 10 < th dose independent rect. 7 20
340 47.59 precipitation 0.1 10 < th dose dependent rect. 7 20
344 47.61 wind 7.0 270 < th dose independent rect. 13 16
348 47.64 humidity 50.0 270 > th dose dependent rect. 1 4
366 47.73 wind 9.0 1440 < th dose independent rect. 4 4
367 47.73 temperature 10.0 1440 > th dose independent rect. 4 4
370 47.73 temperature 30.0 1440 < th dose independent rect. 4 4
374 47.73 humidity 50.0 1440 > th dose independent rect. 4 4
379 47.73 atmosphere 995.0 1440 > th dose independent rect. 4 4
380 47.73 atmosphere 1015.0 1440 < th dose independent rect. 4 4
383 47.73 temperature 10.0 1440 > th dose independent rect. 8 20
386 47.74 temperature 30.0 270 < th dose independent rect. 5 8
400 47.79 radiation 1.0 270 < th dose independent rect. 1 10
434 47.84 humidity 70.0 30 > th dose independent rect. 19 8
446 47.87 atmosphere 1015.0 90 < th dose dependent rect. 3 4
456 47.91 wind 7.0 90 < th dose independent rect. 15 15
459 47.91 radiation 30.0 270 < th dose dependent rect. 15 10
478 47.98 temperature 20.0 270 > th dose independent rect. 19 16
485 48.00 radiation 20.0 270 < th dose independent rect. 15 10
493 48.03 wind 7.0 30 < th dose independent rect. 12 19
494 48.04 atmosphere 995.0 90 > th dose dependent rect. 3 3
497 48.05 wind 7.0 270 < th dose independent rect. 1 16
501 48.06 atmosphere 1015.0 270 < th dose dependent rect. 1 4
505 48.08 humidity 50.0 270 > th dose independent rect. 6 19
523 48.11 humidity 50.0 270 > th dose dependent rect. 3 1
558 48.21 wind 7.0 10 < th dose independent rect. 16 15
560 48.21 radiation 1.0 270 < th dose dependent sin 4 NA
586 48.23 radiation 40.0 1440 < th dose independent rect. 4 4
602 48.27 wind 7.0 270 < th dose independent rect. 11 8
606 48.28 atmosphere 995.0 10 > th dose dependent rect. 3 4
672 48.34 temperature 30.0 270 < th dose independent rect. 19 16
714 48.39 humidity 50.0 270 > th dose independent rect. 15 10
748 48.45 temperature 20.0 270 > th dose independent rect. 19 6
759 48.46 temperature 10.0 270 > th dose dependent rect. 10 9
765 48.48 temperature 10.0 270 > th dose dependent rect. 19 6
870 48.59 atmosphere 995.0 10 > th dose independent rect. 7 9
911 48.61 radiation 30.0 14400 < th dose dependent rect. 20 8
938 48.63 precipitation 0.1 270 < th dose independent rect. 1 16
945 48.63 precipitation 0.1 270 < th dose dependent rect. 1 16
962 48.65 precipitation 0.1 270 < th dose independent rect. 17 8
970 48.65 precipitation 0.1 270 < th dose dependent rect. 17 8
976 48.66 atmosphere 1015.0 270 < th dose dependent rect. 3 1