Os02g0160800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0160800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 256.15 | 0.752 | 2.86 | 0.708 | 0.217 | -4.67 | 0.498 | 19.6 | -0.0247 | 21.5 | 49.44 | 250 | -- | -- |
| 276.58 | 0.781 | 2.92 | 0.612 | 0.17 | -0.438 | 0.569 | -- | -0.0204 | 19.8 | 41 | 578 | -- | -- |
| 256.54 | 0.746 | 2.84 | 0.689 | 0.194 | -7.51 | -- | 26.5 | -0.0209 | 21.4 | 48.45 | 240 | -- | -- |
| 277.44 | 0.781 | 2.92 | 0.597 | 0.17 | -0.467 | -- | -- | -0.0206 | 20.5 | 40.73 | 489 | -- | -- |
| 258.7 | 0.749 | 2.83 | 0.687 | -- | -8.19 | -- | 28.3 | -0.0136 | -- | 48.19 | 240 | -- | -- |
| 277.12 | 0.78 | 2.92 | 0.595 | 0.177 | -- | 0.579 | -- | -0.0187 | 20.1 | -- | -- | -- | -- |
| 278.07 | 0.781 | 2.92 | 0.578 | 0.176 | -- | -- | -- | -0.019 | 20.7 | -- | -- | -- | -- |
| 279.05 | 0.781 | 2.91 | 0.598 | -- | -0.515 | -- | -- | -0.0224 | -- | 40.73 | 489 | -- | -- |
| 286.69 | 0.793 | 2.93 | -- | 0.171 | -0.244 | -- | -- | -0.0853 | 20.9 | 40 | 580 | -- | -- |
| 279.83 | 0.782 | 2.91 | 0.577 | -- | -- | -- | -- | -0.0204 | -- | -- | -- | -- | -- |
| 286.86 | 0.792 | 2.93 | -- | 0.175 | -- | -- | -- | -0.0833 | 21 | -- | -- | -- | -- |
| 288.35 | 0.793 | 2.93 | -- | -- | -0.298 | -- | -- | -0.087 | -- | 40.33 | 441 | -- | -- |
| 288.62 | 0.793 | 2.93 | -- | -- | -- | -- | -- | -0.0844 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 245.56 | wind | 3.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 2 | 245.65 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 22 | 2 |
| 4 | 245.96 | wind | 3.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 14 | 248.56 | wind | 7.0 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 21 | 249.56 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 2 |
| 34 | 250.32 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 22 | 2 |
| 43 | 250.68 | wind | 1.0 | 10 | < th | dose independent | rect. | 13 | 9 |
| 53 | 250.95 | wind | 5.0 | 1440 | < th | dose independent | rect. | 19 | 8 |
| 60 | 251.14 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 13 | 2 |
| 68 | 251.55 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 70 | 251.60 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 73 | 251.66 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 22 | 2 |
| 74 | 251.66 | wind | 5.0 | 1440 | > th | dose independent | rect. | 19 | 8 |
| 147 | 252.84 | wind | 1.0 | 10 | < th | dose dependent | rect. | 14 | 4 |
| 187 | 253.33 | wind | 5.0 | 1440 | < th | dose independent | sin | 10 | NA |
| 191 | 253.36 | humidity | 50.0 | 270 | < th | dose dependent | rect. | 12 | 6 |
| 216 | 253.44 | humidity | 50.0 | 270 | < th | dose dependent | rect. | 12 | 4 |
| 229 | 253.61 | wind | 5.0 | 1440 | > th | dose independent | sin | 10 | NA |
| 234 | 253.64 | humidity | 50.0 | 270 | < th | dose independent | rect. | 12 | 6 |
| 252 | 253.65 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 12 | 12 |
| 264 | 253.74 | humidity | 50.0 | 10 | < th | dose independent | rect. | 15 | 2 |
| 265 | 253.74 | humidity | 50.0 | 720 | < th | dose independent | rect. | 12 | 3 |
| 304 | 253.98 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 14 | 10 |
| 328 | 254.01 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 14 | 2 |
| 377 | 254.27 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 428 | 254.47 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 15 | 2 |
| 437 | 254.50 | humidity | 50.0 | 270 | < th | dose independent | sin | 14 | NA |
| 452 | 254.58 | humidity | 50.0 | 270 | < th | dose dependent | sin | 14 | NA |
| 457 | 254.60 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 482 | 254.69 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 539 | 254.91 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 617 | 255.09 | humidity | 50.0 | 270 | > th | dose independent | sin | 15 | NA |
| 618 | 255.09 | atmosphere | 1015.0 | 4320 | > th | dose independent | sin | 16 | NA |
| 635 | 255.16 | wind | 1.0 | 10 | < th | dose dependent | rect. | 13 | 9 |
| 647 | 255.20 | atmosphere | 1015.0 | 4320 | < th | dose independent | sin | 16 | NA |
| 649 | 255.20 | atmosphere | 1015.0 | 4320 | > th | dose dependent | sin | 16 | NA |
| 688 | 255.26 | humidity | 50.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 744 | 255.42 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 22 | 3 |
| 746 | 255.42 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 22 | 3 |
| 749 | 255.43 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 12 | 5 |
| 762 | 255.48 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 766 | 255.48 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 769 | 255.49 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 899 | 255.76 | humidity | 50.0 | 30 | < th | dose dependent | sin | 12 | NA |