Os02g0160400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Monosaccharide transporter 3.
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Os02g0160400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Monosaccharide transporter 3.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 133.02 | 0.542 | 3.1 | 0.0877 | 0.17 | 0.764 | -0.854 | -2.07 | 0.46 | 4.48 | 49.44 | 137 | -- | -- |
| 134.87 | 0.541 | 3.11 | 0.109 | 0.181 | 1.11 | -0.668 | -- | 0.454 | 4.82 | 50 | 136 | -- | -- |
| 134.79 | 0.541 | 3.1 | 0.0859 | 0.159 | 0.773 | -- | -1.66 | 0.461 | 5.04 | 49.69 | 136 | -- | -- |
| 136.06 | 0.543 | 3.11 | 0.109 | 0.181 | 1.11 | -- | -- | 0.454 | 4.78 | 50 | 136 | -- | -- |
| 136.12 | 0.543 | 3.1 | 0.0922 | -- | 0.743 | -- | -1.53 | 0.466 | -- | 49.97 | 136 | -- | -- |
| 144.95 | 0.564 | 3.11 | 0.0196 | 0.173 | -- | -0.555 | -- | 0.459 | 8.07 | -- | -- | -- | -- |
| 145.77 | 0.565 | 3.11 | 0.00563 | 0.175 | -- | -- | -- | 0.46 | 8.97 | -- | -- | -- | -- |
| 137.66 | 0.546 | 3.1 | 0.0926 | -- | 1 | -- | -- | 0.467 | -- | 50 | 136 | -- | -- |
| 136.34 | 0.544 | 3.11 | -- | 0.177 | 1.08 | -- | -- | 0.449 | 4.67 | 50 | 136 | -- | -- |
| 147.52 | 0.568 | 3.11 | 0.00547 | -- | -- | -- | -- | 0.462 | -- | -- | -- | -- | -- |
| 145.77 | 0.565 | 3.11 | -- | 0.175 | -- | -- | -- | 0.46 | 8.97 | -- | -- | -- | -- |
| 137.9 | 0.547 | 3.11 | -- | -- | 0.977 | -- | -- | 0.449 | -- | 49.99 | 136 | -- | -- |
| 147.52 | 0.567 | 3.11 | -- | -- | -- | -- | -- | 0.461 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 126.88 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 2 | 127.55 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 10 |
| 4 | 127.63 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 5 | 127.76 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 6 | 127.79 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 7 | 127.82 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 21 | 5 |
| 21 | 128.47 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 31 | 128.47 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 44 | 129.10 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 45 | 129.16 | wind | 9.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 48 | 129.53 | humidity | 50.0 | 10 | > th | dose independent | sin | 8 | NA |
| 51 | 129.76 | wind | 9.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 68 | 131.52 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 87 | 131.72 | humidity | 60.0 | 270 | < th | dose independent | rect. | 10 | 1 |
| 89 | 131.76 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 90 | 131.96 | atmosphere | 1010.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 123 | 132.07 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 22 | 1 |
| 133 | 132.25 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 134 | 132.25 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 160 | 132.36 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 163 | 132.38 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 166 | 132.44 | radiation | 40.0 | 270 | > th | dose independent | rect. | 10 | 1 |
| 167 | 132.44 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 168 | 132.46 | atmosphere | 1010.0 | 30 | > th | dose dependent | sin | 22 | NA |
| 183 | 132.55 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 223 | 132.61 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 225 | 132.61 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 226 | 132.61 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 230 | 132.61 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 232 | 132.61 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 237 | 132.61 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 238 | 132.61 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 239 | 132.61 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 244 | 132.61 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 248 | 132.63 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 255 | 132.66 | atmosphere | 1010.0 | 30 | > th | dose dependent | rect. | 24 | 13 |
| 266 | 132.67 | atmosphere | 1010.0 | 30 | > th | dose dependent | sin | 2 | NA |
| 384 | 132.80 | humidity | 60.0 | 720 | > th | dose independent | rect. | 3 | 8 |
| 401 | 132.90 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 402 | 132.90 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 507 | 133.01 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 519 | 133.11 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 529 | 133.24 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 544 | 133.29 | humidity | 60.0 | 270 | < th | dose independent | rect. | 9 | 4 |
| 561 | 133.36 | radiation | 10.0 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 586 | 133.42 | humidity | 60.0 | 270 | < th | dose independent | rect. | 19 | 18 |
| 607 | 133.51 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 3 | 9 |
| 623 | 133.55 | humidity | 60.0 | 270 | < th | dose dependent | rect. | 9 | 4 |
| 713 | 133.58 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 733 | 133.58 | humidity | 60.0 | 270 | < th | dose dependent | rect. | 19 | 18 |
| 752 | 133.63 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 759 | 133.67 | humidity | 60.0 | 270 | < th | dose independent | sin | 7 | NA |
| 760 | 133.67 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 815 | 133.80 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 816 | 133.80 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 819 | 133.80 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 823 | 133.80 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 832 | 133.80 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 833 | 133.80 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 853 | 133.80 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 3 | 3 |
| 855 | 133.80 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 869 | 133.83 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 870 | 133.83 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 4 | 3 |
| 874 | 133.85 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 909 | 133.96 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 924 | 133.97 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 948 | 134.04 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 18 | 3 |
| 960 | 134.06 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 18 | 17 |
| 969 | 134.11 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 15 | 18 |
| 984 | 134.15 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |