Os02g0159900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : AAA ATPase, central region domain containing protein.
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Os02g0159900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : AAA ATPase, central region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.3 | 0.468 | 3.16 | 0.0189 | 0.585 | -0.391 | -0.321 | -2.67 | 1.63 | 21.9 | 68.31 | 8245 | -- | -- |
| 108.22 | 0.485 | 3.2 | 0.265 | 0.601 | -0.58 | -0.472 | -- | 1.7 | 21.7 | 74.62 | 6941 | -- | -- |
| 99.68 | 0.465 | 3.16 | 0.0322 | 0.589 | -0.389 | -- | -2.73 | 1.63 | 21.8 | 68.35 | 8202 | -- | -- |
| 108.06 | 0.484 | 3.15 | 0.253 | 0.607 | -0.756 | -- | -- | 1.83 | 21.7 | 74.99 | 6946 | -- | -- |
| 119.79 | 0.51 | 3.15 | 0.0496 | -- | -0.242 | -- | -2.77 | 1.6 | -- | 68.55 | 8269 | -- | -- |
| 115.73 | 0.504 | 3.2 | 0.283 | 0.555 | -- | -0.507 | -- | 1.59 | 21.7 | -- | -- | -- | -- |
| 116.68 | 0.506 | 3.2 | 0.303 | 0.56 | -- | -- | -- | 1.59 | 21.6 | -- | -- | -- | -- |
| 126.87 | 0.525 | 3.14 | 0.223 | -- | -0.709 | -- | -- | 1.81 | -- | 75 | 7257 | -- | -- |
| 109.45 | 0.487 | 3.15 | -- | 0.595 | -0.79 | -- | -- | 1.81 | 21.8 | 74.97 | 6958 | -- | -- |
| 135.19 | 0.543 | 3.18 | 0.307 | -- | -- | -- | -- | 1.59 | -- | -- | -- | -- | -- |
| 119.09 | 0.51 | 3.21 | -- | 0.56 | -- | -- | -- | 1.55 | 21.6 | -- | -- | -- | -- |
| 128.25 | 0.527 | 3.13 | -- | -- | -0.747 | -- | -- | 1.81 | -- | 74.01 | 7257 | -- | -- |
| 137.67 | 0.548 | 3.19 | -- | -- | -- | -- | -- | 1.55 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 96.96 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 2 | 97.16 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 3 | 97.16 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 4 | 97.17 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 13 | 98.23 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 15 |
| 15 | 98.44 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 15 |
| 38 | 99.74 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 54 | 100.02 | humidity | 70.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 55 | 100.04 | humidity | 70.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 62 | 100.18 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 71 | 100.28 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 14 | NA |
| 80 | 100.35 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 15 | 18 |
| 97 | 100.42 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 99 | 100.45 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 102 | 100.47 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 113 | 100.54 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 13 | 8 |
| 150 | 100.60 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 166 | 100.65 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 20 |
| 181 | 100.71 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 10 |
| 187 | 100.72 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 5 |
| 234 | 100.76 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 21 |
| 236 | 100.78 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 256 | 100.89 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 4 |
| 257 | 100.89 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 13 |
| 261 | 100.91 | humidity | 60.0 | 14400 | < th | dose independent | sin | 14 | NA |
| 269 | 100.93 | humidity | 60.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 273 | 100.94 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 8 |
| 285 | 100.95 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 5 |
| 303 | 100.99 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 19 |
| 307 | 101.00 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 15 | NA |
| 332 | 101.03 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 9 | 2 |
| 351 | 101.07 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 21 |
| 352 | 101.07 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 21 |
| 365 | 101.08 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 19 |
| 375 | 101.09 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 10 |
| 406 | 101.12 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 5 |
| 429 | 101.13 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 440 | 101.15 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 5 |
| 515 | 101.21 | humidity | 70.0 | 14400 | < th | dose dependent | no | NA | NA |
| 517 | 101.21 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 6 | 16 |
| 623 | 101.25 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 648 | 101.29 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 16 | 9 |
| 656 | 101.30 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 21 |
| 668 | 101.31 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 23 |
| 731 | 101.36 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 9 |
| 767 | 101.38 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 773 | 101.39 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 805 | 101.41 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 18 | 23 |
| 910 | 101.49 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 16 | 18 |
| 912 | 101.49 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 0 | NA |
| 945 | 101.52 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 7 |
| 946 | 101.52 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 16 |
| 962 | 101.53 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 6 | 9 |