Os02g0156500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0156500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 105.73 | 0.483 | 6.05 | -0.637 | 0.0778 | -1.53 | 0.821 | 0.00559 | -0.356 | 17.5 | 29.5 | 27 | -- | -- |
| 105.73 | 0.479 | 6.05 | -0.636 | 0.0776 | -1.53 | 0.82 | -- | -0.356 | 17.5 | 29.5 | 26 | -- | -- |
| 107.17 | 0.482 | 6.04 | -0.589 | 0.089 | -1.52 | -- | -0.296 | -0.338 | 15.8 | 29.51 | 26 | -- | -- |
| 107.31 | 0.482 | 6.05 | -0.626 | 0.093 | -1.53 | -- | -- | -0.351 | 16.1 | 29.5 | 26 | -- | -- |
| 107.49 | 0.483 | 6.04 | -0.598 | -- | -1.6 | -- | -0.348 | -0.351 | -- | 29.51 | 27 | -- | -- |
| 137.06 | 0.549 | 5.98 | -0.282 | 0.598 | -- | 0.653 | -- | -0.0445 | 14.8 | -- | -- | -- | -- |
| 138.45 | 0.551 | 5.98 | -0.266 | 0.598 | -- | -- | -- | -0.041 | 14.6 | -- | -- | -- | -- |
| 107.65 | 0.483 | 6.05 | -0.657 | -- | -1.59 | -- | -- | -0.361 | -- | 29.6 | 27 | -- | -- |
| 116.83 | 0.503 | 6.01 | -- | 0.186 | -1.5 | -- | -- | -0.184 | 15.2 | 35.7 | 10 | -- | -- |
| 159.38 | 0.59 | 5.98 | -0.292 | -- | -- | -- | -- | -0.0559 | -- | -- | -- | -- | -- |
| 140.32 | 0.554 | 5.97 | -- | 0.603 | -- | -- | -- | -0.0113 | 14.6 | -- | -- | -- | -- |
| 118.17 | 0.506 | 6.02 | -- | -- | -1.59 | -- | -- | -0.22 | -- | 33.36 | 19 | -- | -- |
| 161.63 | 0.593 | 5.97 | -- | -- | -- | -- | -- | -0.0236 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 103.19 | temperature | 15 | 90 | > th | dose dependent | rect. | 18 | 23 |
| 3 | 103.66 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 8 | 104.49 | temperature | 15 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 14 | 105.46 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 15 | 105.48 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 17 | 105.59 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 22 | 105.74 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 24 | 105.76 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 30 | 105.88 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 22 |
| 33 | 105.98 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 37 | 106.10 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 38 | 106.12 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 47 | 106.35 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 21 |
| 48 | 106.41 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 50 | 106.44 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 57 | 106.56 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 18 |
| 59 | 106.58 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 62 | 106.65 | temperature | 15 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 79 | 107.22 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 115 | 107.97 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 21 |
| 129 | 108.15 | temperature | 20 | 10 | > th | dose independent | rect. | 19 | 22 |
| 174 | 108.70 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 10 |
| 176 | 108.71 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 23 |
| 177 | 108.74 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 201 | 109.04 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 210 | 109.18 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 10 |
| 219 | 109.25 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 23 |
| 245 | 109.44 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 252 | 109.51 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 16 |
| 255 | 109.54 | temperature | 20 | 1440 | > th | dose independent | sin | 13 | NA |
| 280 | 109.66 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 281 | 109.67 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 18 |
| 289 | 109.73 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 19 |
| 306 | 109.82 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 13 |
| 336 | 109.95 | temperature | 20 | 1440 | < th | dose independent | sin | 12 | NA |
| 340 | 109.95 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 21 |
| 343 | 109.96 | temperature | 20 | 270 | < th | dose independent | rect. | 23 | 22 |
| 347 | 109.97 | temperature | 20 | 10 | > th | dose independent | rect. | 23 | 23 |
| 356 | 110.01 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 17 |
| 357 | 110.01 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 19 |
| 392 | 110.10 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 15 |
| 418 | 110.16 | temperature | 15 | 90 | > th | dose dependent | sin | 5 | NA |
| 423 | 110.17 | temperature | 15 | 270 | > th | dose dependent | sin | 7 | NA |
| 442 | 110.22 | temperature | 20 | 1440 | > th | dose independent | rect. | 9 | 22 |
| 458 | 110.27 | temperature | 20 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 465 | 110.29 | temperature | 20 | 270 | < th | dose independent | rect. | 1 | 22 |
| 490 | 110.35 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 497 | 110.37 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 14 |
| 608 | 110.60 | temperature | 20 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 623 | 110.64 | temperature | 20 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 673 | 110.71 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 23 |
| 702 | 110.77 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 721 | 110.82 | temperature | 20 | 1440 | < th | dose independent | rect. | 9 | 19 |
| 751 | 110.87 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 787 | 110.95 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 16 |
| 821 | 111.03 | temperature | 20 | 270 | < th | dose independent | rect. | 17 | 23 |
| 825 | 111.04 | temperature | 20 | 270 | < th | dose independent | rect. | 14 | 23 |
| 835 | 111.07 | temperature | 20 | 270 | < th | dose independent | no | NA | NA |
| 882 | 111.17 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 918 | 111.22 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 942 | 111.26 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |