Os02g0153700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os02g0153700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 617.5 | 1.17 | 6.4 | 1.23 | 3.42 | 9.16 | 1.15 | 19.8 | 1.1 | 22.1 | 0.7241 | 1496 | 19.6 | -- |
| 721.69 | 1.25 | 6.23 | 2.04 | 3.36 | 3.72 | 1.41 | -- | 1.06 | 20.5 | 1.934 | 1579 | 1.07 | -- |
| 621.33 | 1.16 | 6.41 | 1.19 | 3.42 | 9.02 | -- | 19.5 | 1.08 | 22.2 | 0.6492 | 1494 | 19.6 | -- |
| 702.05 | 1.23 | 6.2 | 1.44 | 3 | 4.55 | -- | -- | 0.914 | 18.7 | 1.78 | 1649 | 5.14 | -- |
| 958.73 | 1.44 | 6.1 | 1.48 | -- | 6.53 | -- | 7.32 | 1.14 | -- | 0.004953 | 1506 | 6.57 | -- |
| 853.97 | 1.37 | 6.21 | 1.29 | 3.47 | -- | 0.958 | -- | 0.78 | 22.4 | -- | -- | -- | -- |
| 857.7 | 1.37 | 6.21 | 1.25 | 3.46 | -- | -- | -- | 0.777 | 22.4 | -- | -- | -- | -- |
| 868.89 | 1.37 | 5.99 | 1.73 | -- | 5.51 | -- | -- | 1.35 | -- | 2.135 | 1559 | 7.81 | -- |
| 763.49 | 1.29 | 6.22 | -- | 3.25 | 5 | -- | -- | 0.944 | 18 | 1.91 | 1675 | 5.48 | -- |
| 1592.08 | 1.86 | 6.12 | 1.31 | -- | -- | -- | -- | 0.79 | -- | -- | -- | -- | -- |
| 899 | 1.4 | 6.24 | -- | 3.47 | -- | -- | -- | 0.637 | 22.5 | -- | -- | -- | -- |
| 841.1 | 1.35 | 6.09 | -- | -- | 4.68 | -- | -- | 0.95 | -- | 424.7 | 1462 | 7.61 | -- |
| 1637.37 | 1.89 | 6.15 | -- | -- | -- | -- | -- | 0.644 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 612.50 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 2 | 613.74 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 4 | 614.80 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 7 | 615.59 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 5 |
| 9 | 615.64 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 17 | 616.06 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 19 | 616.35 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 30 | 626.19 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 31 | 626.37 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 34 | 627.69 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 70 | 629.51 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 81 | 630.26 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 86 | 632.33 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 88 | 632.69 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 89 | 632.69 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 101 | 633.05 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 17 | 5 |
| 102 | 633.17 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 103 | 633.22 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 18 | 3 |
| 106 | 633.77 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 116 | 635.74 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 118 | 636.03 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 17 | 10 |
| 122 | 636.39 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 16 | 12 |
| 134 | 637.27 | humidity | 90.0 | 43200 | < th | dose independent | sin | 14 | NA |
| 137 | 637.45 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 142 | 637.58 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 15 |
| 153 | 637.82 | humidity | 70.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 179 | 638.50 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 17 | 10 |
| 191 | 638.84 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 15 | 16 |
| 210 | 639.52 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 215 | 639.70 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 233 | 639.99 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 17 | 16 |
| 234 | 639.99 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 253 | 640.36 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 263 | 640.44 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 268 | 640.49 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 280 | 640.58 | humidity | 90.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 304 | 640.90 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 310 | 640.99 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 23 | NA |
| 333 | 641.20 | humidity | 70.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 392 | 641.76 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 7 | 2 |
| 460 | 642.25 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 480 | 642.31 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 558 | 642.86 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 574 | 642.98 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 11 | 22 |
| 615 | 643.29 | radiation | 30.0 | 4320 | < th | dose dependent | rect. | 18 | 3 |
| 655 | 643.56 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 665 | 643.62 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 681 | 643.73 | temperature | 25.0 | 14400 | > th | dose dependent | no | NA | NA |
| 715 | 644.09 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 719 | 644.16 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 759 | 644.48 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 787 | 644.86 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 815 | 645.20 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 19 |
| 882 | 645.98 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 18 | 8 |
| 973 | 646.73 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 18 | 11 |
| 979 | 646.78 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 2 | 19 |