Os02g0153200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0153200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein kinase-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 157.07 | 0.589 | 6.46 | -0.161 | 1.09 | 0.807 | 0.63 | 0.247 | -0.0379 | 8.4 | 69.12 | 1282 | -- | -- |
| 157.21 | 0.584 | 6.46 | -0.18 | 1.09 | 0.813 | 0.622 | -- | -0.0399 | 8.37 | 69.04 | 1281 | -- | -- |
| 158.29 | 0.586 | 6.46 | -0.148 | 1.09 | 0.807 | -- | 0.187 | -0.0372 | 8.47 | 69.07 | 1281 | -- | -- |
| 158.34 | 0.586 | 6.47 | -0.176 | 1.09 | 0.821 | -- | -- | -0.0469 | 8.48 | 69 | 1281 | -- | -- |
| 220.16 | 0.691 | 6.49 | -0.138 | -- | 0.776 | -- | 0.183 | -0.0324 | -- | 69 | 1409 | -- | -- |
| 182.22 | 0.633 | 6.45 | -0.0133 | 1.06 | -- | 0.664 | -- | 0.0204 | 7.83 | -- | -- | -- | -- |
| 183.45 | 0.634 | 6.45 | 0.00538 | 1.06 | -- | -- | -- | 0.0203 | 7.93 | -- | -- | -- | -- |
| 220.1 | 0.691 | 6.49 | -0.162 | -- | 0.782 | -- | -- | -0.0295 | -- | 69 | 1409 | -- | -- |
| 159.15 | 0.588 | 6.47 | -- | 1.09 | 0.799 | -- | -- | -0.0387 | 8.48 | 70 | 1276 | -- | -- |
| 244.96 | 0.731 | 6.48 | 0.0166 | -- | -- | -- | -- | 0.0343 | -- | -- | -- | -- | -- |
| 183.45 | 0.634 | 6.45 | -- | 1.06 | -- | -- | -- | 0.0197 | 7.93 | -- | -- | -- | -- |
| 220.77 | 0.692 | 6.49 | -- | -- | 0.758 | -- | -- | -0.0129 | -- | 69.31 | 1409 | -- | -- |
| 244.97 | 0.731 | 6.48 | -- | -- | -- | -- | -- | 0.0325 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 153.50 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 2 | 153.96 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 3 | 154.41 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 4 | 154.45 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 5 | 154.57 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 10 | 155.43 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 12 | 8 |
| 23 | 155.67 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 14 | 6 |
| 37 | 155.82 | humidity | 70.0 | 1440 | < th | dose independent | sin | 15 | NA |
| 39 | 155.86 | humidity | 70.0 | 1440 | > th | dose independent | sin | 15 | NA |
| 41 | 155.94 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 12 | 17 |
| 44 | 155.96 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 12 | 8 |
| 47 | 155.98 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 12 | 13 |
| 80 | 156.06 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 14 | 15 |
| 85 | 156.08 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 14 | 6 |
| 96 | 156.11 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 14 | 11 |
| 168 | 156.94 | wind | 1.0 | 90 | < th | dose independent | rect. | 23 | 4 |
| 170 | 156.99 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 16 | 10 |
| 174 | 157.12 | wind | 1.0 | 90 | < th | dose independent | rect. | 9 | 19 |
| 190 | 157.46 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 4 |
| 233 | 157.89 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 234 | 157.89 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 247 | 157.91 | wind | 1.0 | 90 | < th | dose independent | rect. | 12 | 16 |
| 274 | 158.39 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 15 | 8 |
| 278 | 158.42 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 15 | NA |
| 283 | 158.45 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 12 | 3 |
| 295 | 158.53 | wind | 1.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 297 | 158.53 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 15 | 15 |
| 305 | 158.57 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 16 | 7 |
| 334 | 158.67 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 335 | 158.70 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 12 |
| 342 | 158.74 | wind | 1.0 | 90 | < th | dose independent | rect. | 1 | 4 |
| 356 | 158.77 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 12 | 5 |
| 389 | 158.81 | wind | 1.0 | 90 | < th | dose dependent | rect. | 23 | 4 |
| 394 | 158.89 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 397 | 158.92 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 10 |
| 400 | 158.95 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 401 | 158.96 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 12 | 3 |
| 413 | 158.97 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 4 |
| 416 | 158.97 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 438 | 159.02 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 12 | 12 |
| 533 | 159.44 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 4 |
| 553 | 159.50 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 12 | 3 |
| 593 | 159.58 | wind | 1.0 | 720 | < th | dose dependent | rect. | 23 | 1 |
| 633 | 159.72 | humidity | 70.0 | 1440 | < th | dose independent | no | NA | NA |
| 685 | 159.72 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 14 | 23 |
| 699 | 159.78 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 729 | 159.91 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 18 | NA |
| 742 | 159.96 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 16 | 4 |
| 743 | 159.97 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 16 | 12 |
| 746 | 159.98 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 750 | 159.98 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 8 | 17 |
| 753 | 160.01 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 754 | 160.01 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 12 | 17 |
| 770 | 160.03 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 12 | 6 |
| 777 | 160.04 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 12 | 8 |
| 806 | 160.08 | humidity | 80.0 | 720 | < th | dose independent | rect. | 19 | 1 |
| 812 | 160.09 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 16 | 8 |
| 821 | 160.11 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 12 | 12 |
| 858 | 160.23 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 19 | 23 |
| 865 | 160.25 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 872 | 160.26 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 23 | 21 |
| 874 | 160.27 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 2 | 18 |
| 898 | 160.29 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 2 | 22 |
| 904 | 160.30 | humidity | 70.0 | 1440 | > th | dose independent | no | NA | NA |
| 918 | 160.30 | radiation | 30.0 | 1440 | > th | dose dependent | sin | 14 | NA |
| 919 | 160.30 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 971 | 160.35 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 14 | 23 |
| 982 | 160.37 | radiation | 40.0 | 1440 | > th | dose independent | sin | 14 | NA |
| 996 | 160.43 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 12 | 7 |