Os02g0152900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0152900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 236.69 | 0.723 | 9.29 | -0.775 | 3.72 | 2.63 | -1.11 | 0.357 | -0.808 | 20.7 | 24.12 | 261 | 23.4 | -- |
| 236.57 | 0.716 | 9.3 | -0.799 | 3.73 | 2.67 | -1.03 | -- | -0.816 | 20.8 | 24.12 | 254 | 23.2 | -- |
| 240.41 | 0.722 | 9.29 | -0.7 | 3.76 | 2.61 | -- | 0.893 | -0.794 | 20.7 | 23.99 | 249 | 23.1 | -- |
| 240.67 | 0.723 | 9.3 | -0.786 | 3.73 | 2.67 | -- | -- | -0.819 | 20.8 | 24.04 | 250 | 23 | -- |
| 337.61 | 0.856 | 9.17 | -0.744 | -- | 3.82 | -- | -2.03 | -0.681 | -- | -14.04 | 134 | 11 | -- |
| 328.23 | 0.849 | 9.22 | -0.472 | 3.51 | -- | -1.23 | -- | -0.534 | 19.9 | -- | -- | -- | -- |
| 332.63 | 0.854 | 9.23 | -0.439 | 3.52 | -- | -- | -- | -0.535 | 19.9 | -- | -- | -- | -- |
| 331.73 | 0.848 | 9.13 | -0.505 | -- | 3.65 | -- | -- | -0.554 | -- | -119.5 | 367 | 13.2 | -- |
| 256.05 | 0.745 | 9.27 | -- | 3.72 | 2.46 | -- | -- | -0.701 | 20.7 | 24.15 | 229 | 22.9 | -- |
| 1003.67 | 1.48 | 9.14 | -0.479 | -- | -- | -- | -- | -0.583 | -- | -- | -- | -- | -- |
| 337.7 | 0.86 | 9.21 | -- | 3.52 | -- | -- | -- | -0.486 | 19.8 | -- | -- | -- | -- |
| 337.33 | 0.855 | 9.12 | -- | -- | 3.6 | -- | -- | -0.505 | -- | -319.6 | 602 | 15.1 | -- |
| 1009.72 | 1.48 | 9.13 | -- | -- | -- | -- | -- | -0.53 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 234.35 | temperature | 25 | 270 | < th | dose independent | rect. | 3 | 9 |
| 6 | 238.59 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 9 |
| 10 | 241.10 | temperature | 25 | 270 | > th | dose independent | rect. | 7 | 8 |
| 14 | 242.05 | temperature | 25 | 270 | > th | dose dependent | sin | 6 | NA |
| 24 | 244.59 | temperature | 25 | 270 | > th | dose independent | sin | 3 | NA |
| 25 | 244.63 | temperature | 25 | 270 | > th | dose independent | rect. | 1 | 14 |
| 33 | 246.05 | temperature | 25 | 90 | > th | dose dependent | sin | 3 | NA |
| 41 | 247.22 | temperature | 25 | 270 | < th | dose independent | sin | 3 | NA |
| 43 | 247.38 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 10 |
| 47 | 247.51 | temperature | 25 | 270 | > th | dose dependent | rect. | 23 | 15 |
| 250 | 257.72 | temperature | 30 | 270 | < th | dose dependent | sin | 3 | NA |
| 345 | 261.21 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 12 |
| 386 | 262.50 | temperature | 25 | 90 | > th | dose dependent | rect. | 19 | 22 |
| 454 | 264.17 | radiation | 40 | 270 | > th | dose dependent | rect. | 14 | 21 |
| 482 | 264.79 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 485 | 264.95 | radiation | 40 | 270 | > th | dose dependent | sin | 11 | NA |
| 487 | 264.99 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 16 |
| 518 | 265.44 | temperature | 25 | 270 | > th | dose independent | rect. | 8 | 3 |
| 526 | 265.55 | temperature | 25 | 720 | > th | dose independent | rect. | 8 | 1 |
| 551 | 266.17 | radiation | 40 | 270 | > th | dose dependent | rect. | 8 | 3 |
| 733 | 268.69 | temperature | 25 | 270 | < th | dose dependent | rect. | 6 | 3 |
| 877 | 270.69 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 1 |
| 939 | 271.19 | radiation | 40 | 270 | < th | dose independent | sin | 6 | NA |
| 984 | 271.55 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 6 | 17 |
| 993 | 271.62 | radiation | 40 | 90 | < th | dose independent | rect. | 3 | 23 |