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Os02g0151300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cellulase (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.3 (0.0355) R2 : 0.571
β1 : 1.27 (0.131) R2dD : 0.0969 R2D : 0.115
β2 : 2.93 (0.164) R2dC : 0.969 R2C : 0.158
β3 : -1.27 (0.134) R2dE : 0.274 R2E : -0.586
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 2.12 (0.307) R2dD*E : 0.0448 R2D*E : 0.0593
γ1 : 0.102 (0.0761) R2dN8 : 0.00274 R2N8 : -0.000464
σ : 0.664
deviance : 203.51
__
_____
C
peak time of C : 4.65
E
wheather : radiation
threshold : 0.67
memory length : 352
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
200.24 0.665 10.3 1.27 3.14 -1.44 -2.26 3.77 0.112 4.76 1.608 412 -- --
215.25 0.683 10.3 1.33 3.29 -1.59 1.57 -- 0.134 4.88 0.717 453 -- --
203.51 0.664 10.3 1.27 2.93 -1.27 -- 2.12 0.102 4.65 0.67 352 -- --
221.15 0.693 10.3 1.31 3.53 -1.81 -- -- 0.125 4.82 0.8282 456 -- --
342.66 0.862 10.4 1.26 -- 1.14 -- -3.25 0.345 -- 52.75 727 -- --
230.43 0.712 10.3 1.46 1.88 -- 0.313 -- 0.195 6.15 -- -- -- --
230.65 0.711 10.3 1.46 1.88 -- -- -- 0.194 6.19 -- -- -- --
257.02 0.747 10.4 1.56 -- 2.23 -- -- 0.302 -- 6 733 -- --
264.02 0.757 10.4 -- 4.05 -2.32 -- -- -0.0643 4.63 0.5134 454 -- --
413.26 0.95 10.3 1.51 -- -- -- -- 0.236 -- -- -- -- --
286.94 0.792 10.3 -- 1.9 -- -- -- 0.0317 6.15 -- -- -- --
315.58 0.827 10.3 -- -- 2.11 -- -- 0.184 -- 10 710 -- --
473.67 1.02 10.4 -- -- -- -- -- 0.068 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 191.55 radiation 10 1440 > th dose independent rect. 11 1
2 192.02 humidity 70 720 > th dose independent rect. 17 7
6 194.17 temperature 10 10 > th dose dependent rect. 6 22
8 194.98 radiation 10 1440 < th dose dependent rect. 11 7
10 195.28 temperature 10 90 > th dose dependent rect. 6 21
11 195.39 radiation 10 1440 < th dose dependent rect. 11 17
13 195.43 radiation 10 1440 < th dose dependent rect. 11 14
18 195.57 radiation 10 1440 < th dose dependent rect. 11 10
25 195.68 humidity 60 14400 > th dose independent rect. 20 11
26 195.74 humidity 90 720 < th dose dependent rect. 18 3
30 196.03 humidity 70 720 < th dose independent rect. 19 12
31 196.09 humidity 70 720 < th dose independent rect. 19 1
49 196.32 humidity 80 1440 > th dose independent rect. 11 2
61 196.55 humidity 70 720 < th dose independent rect. 17 14
63 196.57 humidity 70 720 < th dose independent rect. 17 3
74 196.58 humidity 70 720 > th dose independent rect. 17 16
75 196.60 humidity 70 720 < th dose dependent rect. 19 12
77 196.63 humidity 70 720 < th dose dependent rect. 19 1
91 196.72 humidity 50 720 > th dose dependent rect. 17 7
123 197.15 radiation 10 1440 < th dose dependent rect. 11 3
124 197.16 temperature 30 720 < th dose independent rect. 18 1
136 197.31 radiation 20 14400 < th dose independent rect. 18 12
140 197.34 radiation 1 1440 < th dose independent rect. 9 4
141 197.34 radiation 1 1440 < th dose dependent rect. 9 4
152 197.72 humidity 80 1440 < th dose independent rect. 11 2
179 198.21 humidity 70 720 > th dose independent sin 11 NA
194 198.40 radiation 10 1440 < th dose dependent sin 17 NA
207 198.60 humidity 80 1440 < th dose independent rect. 7 8
209 198.66 radiation 1 1440 > th dose independent rect. 13 1
237 198.80 humidity 50 1440 > th dose independent rect. 16 1
253 199.01 radiation 1 90 < th dose dependent rect. 5 22
254 199.03 temperature 25 270 < th dose independent rect. 9 22
264 199.18 wind 3 4320 > th dose independent rect. 8 1
265 199.18 temperature 25 270 < th dose independent rect. 11 19
282 199.33 radiation 1 90 < th dose independent rect. 5 22
287 199.37 humidity 80 14400 < th dose dependent rect. 5 2
294 199.47 humidity 80 1440 > th dose independent rect. 7 9
300 199.55 radiation 1 1440 > th dose independent rect. 9 5
307 199.65 humidity 50 1440 < th dose dependent rect. 16 1
310 199.69 humidity 60 14400 > th dose independent rect. 4 4
315 199.78 humidity 80 14400 > th dose independent rect. 23 4
316 199.79 temperature 30 720 < th dose independent rect. 17 8
318 199.80 humidity 80 14400 < th dose independent rect. 22 3
320 199.81 humidity 50 1440 < th dose independent rect. 16 1
326 199.87 radiation 1 720 < th dose independent rect. 7 18
349 200.06 humidity 80 14400 > th dose independent rect. 22 9
376 200.28 humidity 70 720 > th dose independent rect. 17 3
380 200.30 temperature 30 720 > th dose dependent rect. 18 1
400 200.38 humidity 60 720 > th dose dependent rect. 18 1
436 200.63 humidity 80 14400 < th dose independent rect. 22 9
443 200.69 wind 7 43200 > th dose independent rect. 15 2
447 200.71 humidity 60 14400 > th dose independent rect. 24 8
453 200.77 wind 1 10 > th dose independent sin 4 NA
454 200.78 humidity 70 720 > th dose independent rect. 15 5
489 200.96 radiation 1 720 < th dose independent rect. 8 11
540 201.22 wind 3 4320 < th dose independent rect. 8 1
542 201.22 humidity 80 14400 < th dose dependent rect. 21 10
547 201.24 wind 7 43200 < th dose independent rect. 15 2
556 201.27 radiation 1 1440 > th dose independent rect. 9 1
572 201.38 wind 7 14400 > th dose dependent rect. 15 1
582 201.45 radiation 1 1440 > th dose independent rect. 11 8
607 201.50 humidity 80 1440 < th dose independent sin 2 NA
608 201.51 humidity 70 720 < th dose independent sin 12 NA
611 201.53 radiation 1 720 > th dose independent rect. 5 12
621 201.59 radiation 1 1440 < th dose independent rect. 11 17
639 201.66 temperature 30 43200 > th dose dependent rect. 8 1
658 201.70 radiation 1 720 < th dose independent sin 22 NA
665 201.73 radiation 1 720 < th dose dependent rect. 7 18
669 201.74 radiation 1 1440 < th dose independent rect. 11 10
676 201.75 humidity 80 14400 < th dose dependent rect. 22 1
735 201.95 humidity 50 720 > th dose independent rect. 5 14
736 201.96 humidity 80 1440 > th dose independent sin 1 NA
755 202.01 temperature 20 10 > th dose dependent rect. 6 12
768 202.05 humidity 70 1440 > th dose dependent rect. 11 3
784 202.12 humidity 80 14400 < th dose dependent rect. 21 6
791 202.14 humidity 80 1440 < th dose dependent rect. 15 4
793 202.15 humidity 50 720 > th dose independent rect. 22 19
807 202.16 wind 3 90 < th dose dependent rect. 3 2
875 202.40 humidity 70 720 > th dose independent sin 14 NA
876 202.40 humidity 80 14400 < th dose independent rect. 4 3
879 202.40 humidity 70 10 > th dose dependent rect. 7 21
905 202.47 humidity 80 14400 < th dose independent rect. 2 5
928 202.50 temperature 30 90 < th dose independent rect. 3 15
952 202.59 wind 9 43200 > th dose dependent rect. 13 1
960 202.64 humidity 70 4320 < th dose dependent rect. 18 14
971 202.69 atmosphere 1000 10 > th dose independent rect. 4 14
985 202.73 temperature 30 720 > th dose independent rect. 18 1