Os02g0151100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase domain containing protein.
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Os02g0151100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.23 | 0.456 | 8.24 | -0.0476 | 0.878 | 0.0584 | -0.257 | 4.93 | 0.655 | 23.7 | 29.27 | 4964 | -- | -- |
| 97.77 | 0.461 | 8.13 | 1.04 | 0.838 | 0.606 | -0.204 | -- | 0.782 | 23.8 | 29.8 | 3104 | -- | -- |
| 94.42 | 0.453 | 8.24 | -0.0338 | 0.873 | 0.063 | -- | 4.86 | 0.654 | 23.7 | 29.24 | 4748 | -- | -- |
| 97.89 | 0.461 | 8.13 | 1.09 | 0.88 | 0.644 | -- | -- | 0.771 | 23.7 | 29.9 | 3159 | -- | -- |
| 141.88 | 0.555 | 8.22 | 0.0275 | -- | 0.00703 | -- | 4.68 | 0.676 | -- | 29.27 | 4529 | -- | -- |
| 111.91 | 0.496 | 8.11 | 0.911 | 0.833 | -- | -0.377 | -- | 0.854 | 23.7 | -- | -- | -- | -- |
| 112.53 | 0.497 | 8.11 | 0.926 | 0.834 | -- | -- | -- | 0.856 | 23.7 | -- | -- | -- | -- |
| 138.94 | 0.551 | 8.08 | 1.07 | -- | 0.441 | -- | -- | 0.938 | -- | 27.1 | 33 | -- | -- |
| 127.85 | 0.527 | 8.15 | -- | 0.915 | 0.519 | -- | -- | 0.683 | 23.7 | 31.3 | 3159 | -- | -- |
| 156.3 | 0.584 | 8.09 | 0.95 | -- | -- | -- | -- | 0.866 | -- | -- | -- | -- | -- |
| 135.12 | 0.544 | 8.13 | -- | 0.845 | -- | -- | -- | 0.753 | 23.7 | -- | -- | -- | -- |
| 167.43 | 0.603 | 8.11 | -- | -- | 0.375 | -- | -- | 0.81 | -- | 27.17 | 24 | -- | -- |
| 180.08 | 0.626 | 8.12 | -- | -- | -- | -- | -- | 0.761 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 93.25 | wind | 5.0 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 3 | 93.31 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 14 | 93.75 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 4 | 7 |
| 15 | 93.75 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 2 | 9 |
| 17 | 93.76 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 21 | 93.76 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 21 | 14 |
| 24 | 93.77 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 31 | 93.83 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 8 | 3 |
| 54 | 93.86 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 88 | 94.01 | wind | 5.0 | 43200 | > th | dose independent | rect. | 19 | 15 |
| 89 | 94.01 | wind | 5.0 | 43200 | < th | dose independent | rect. | 19 | 15 |
| 90 | 94.01 | wind | 5.0 | 43200 | > th | dose independent | rect. | 19 | 17 |
| 111 | 94.05 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 121 | 94.06 | wind | 5.0 | 43200 | < th | dose independent | rect. | 19 | 17 |
| 131 | 94.08 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 136 | 94.14 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 18 | 17 |
| 138 | 94.15 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 6 | 3 |
| 139 | 94.15 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 8 | 3 |
| 153 | 94.16 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 178 | 94.23 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 200 | 94.35 | wind | 5.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 222 | 94.40 | temperature | 30.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 226 | 94.40 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 19 | 14 |
| 227 | 94.41 | temperature | 30.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 233 | 94.42 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 246 | 94.48 | wind | 5.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 252 | 94.48 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 255 | 94.48 | temperature | 30.0 | 14400 | > th | dose dependent | sin | 8 | NA |
| 346 | 94.62 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 8 |
| 357 | 94.64 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 14 |
| 370 | 94.67 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 10 |
| 398 | 94.70 | wind | 5.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 406 | 94.72 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 6 |
| 409 | 94.73 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 6 |
| 411 | 94.73 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 6 |
| 429 | 94.76 | wind | 5.0 | 43200 | > th | dose independent | sin | 9 | NA |
| 446 | 94.79 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 550 | 94.97 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 12 |
| 551 | 94.97 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 12 |
| 560 | 94.97 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 12 |
| 572 | 94.98 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 578 | 94.98 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 19 | NA |
| 615 | 95.02 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 621 | 95.02 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 680 | 95.10 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 10 |
| 683 | 95.10 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 10 |
| 702 | 95.12 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 10 |
| 845 | 95.25 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 14 |
| 852 | 95.25 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 14 |
| 858 | 95.26 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 14 |
| 939 | 95.33 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |