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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0150200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.65 (0.0528) R2 : 0.485
β1 : 1.31 (0.192) R2dD : 0.0565 R2D : 0.0316
β2 : -- (--) R2dC : -- R2C : --
β3 : -3.05 (0.198) R2dE : 0.319 R2E : 0.0844
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -13.8 (0.856) R2dD*E : 0.333 R2D*E : 0.14
γ1 : -0.0118 (0.115) R2dN8 : 1.75e-05 R2N8 : -0.00423
σ : 0.965
deviance : 428.91
__
_____
C
peak time of C : --
E
wheather : wind
threshold : 6.7
memory length : 4321
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 18.3
open length of G : 3.02

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
426.82 0.971 3.66 1.36 0.433 -3.08 1.67 -14.5 -0.0367 14.7 7 4320 18.4 3
503.12 1.04 3.65 0.87 0.575 -2.96 0.783 -- -0.107 13.9 8.388 4319 18.4 2.5
416.88 0.951 3.65 1.32 0.438 -3.12 -- -14.3 0.0136 14.6 6.7 4323 18.3 3.02
498.6 1.04 3.65 0.821 0.427 -3.52 -- -- 0.0192 13.7 8.373 4319 18.5 2.44
428.91 0.965 3.65 1.31 -- -3.05 -- -13.8 -0.0118 -- 6.7 4321 18.3 3.02
770.4 1.3 3.6 0.991 0.532 -- 1.67 -- -0.203 14.3 -- -- -- --
780.72 1.31 3.6 1.04 0.533 -- -- -- -0.194 14.1 -- -- -- --
511.16 1.05 3.65 0.696 -- -3.66 -- -- 0.0139 -- 8.382 4319 18.5 2.4
510.5 1.05 3.65 -- 0.496 -3.66 -- -- -0.0454 14.5 8.31 4319 18.4 2.52
797.75 1.32 3.6 1.02 -- -- -- -- -0.206 -- -- -- -- --
809.12 1.33 3.62 -- 0.514 -- -- -- -0.309 14 -- -- -- --
522.52 1.06 3.63 -- -- -3.62 -- -- -0.0307 -- 8.306 4319 18.4 2.53
824.98 1.34 3.63 -- -- -- -- -- -0.319 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 430.29 wind 7 4320 < th dose independent rect. 18 3
2 431.18 wind 7 4320 < th dose independent rect. 18 5
6 438.49 wind 7 4320 > th dose independent rect. 18 3
9 439.94 wind 5 4320 > th dose dependent rect. 20 3
15 442.41 wind 7 4320 > th dose dependent rect. 18 3
27 445.38 wind 9 4320 > th dose dependent rect. 19 7
51 446.66 wind 9 4320 > th dose independent rect. 18 8
133 458.97 humidity 90 1440 < th dose dependent rect. 3 1
138 462.30 atmosphere 995 14400 < th dose independent rect. 15 4
142 462.51 atmosphere 995 14400 > th dose independent rect. 15 4
146 463.18 atmosphere 995 14400 > th dose independent rect. 11 8
187 463.41 atmosphere 995 14400 > th dose independent rect. 7 12
198 463.83 atmosphere 995 14400 > th dose independent rect. 16 1
221 464.32 atmosphere 995 14400 < th dose dependent rect. 15 4
228 465.04 atmosphere 995 14400 < th dose dependent rect. 16 1
307 466.93 humidity 90 1440 < th dose dependent rect. 23 8
354 469.98 humidity 80 1440 < th dose independent rect. 22 1
363 472.29 humidity 90 1440 < th dose dependent rect. 2 5
444 479.99 atmosphere 995 14400 > th dose independent rect. 19 21
488 484.45 atmosphere 995 14400 > th dose independent sin 22 NA
495 484.69 atmosphere 995 14400 > th dose independent sin 4 NA
498 484.93 humidity 70 1440 > th dose dependent rect. 24 7
506 485.31 atmosphere 995 14400 < th dose independent sin 22 NA
512 485.51 atmosphere 995 14400 < th dose dependent sin 0 NA
552 487.08 radiation 1 14400 < th dose dependent rect. 23 3
553 487.09 atmosphere 995 14400 < th dose independent sin 3 NA
626 489.74 radiation 1 14400 < th dose dependent rect. 19 7
795 492.99 atmosphere 995 14400 > th dose independent no NA NA
797 492.99 atmosphere 995 14400 > th dose independent rect. 14 23
798 493.00 atmosphere 995 14400 > th dose independent rect. 10 23
799 493.00 atmosphere 995 14400 > th dose independent rect. 12 23
831 493.16 wind 7 4320 < th dose independent rect. 8 1
847 493.41 wind 5 1440 > th dose independent rect. 7 16
990 495.27 atmosphere 995 14400 < th dose independent no NA NA