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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0149700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Exo70 exocyst complex subunit family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.29 (0.0406) R2 : 0.351
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 2.37 (0.159) R2dE : 0.316 R2E : 0.289
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.492 (0.0855) R2dN8 : 0.0618 R2N8 : 0.0343
σ : 0.762
deviance : 267.69
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_____
C
peak time of C : --
E
wheather : temperature
threshold : 9.471
memory length : 46
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 7.42
open length of G : 21.8

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
254.94 0.75 5.31 0.147 0.403 2.24 0.709 -1.36 -0.492 21 11.33 17 7.36 22.4
256.4 0.746 5.29 0.215 0.392 2.35 0.837 -- -0.476 21.9 11.45 16 7.28 22.5
256.42 0.746 5.31 0.122 0.414 2.17 -- -1.52 -0.502 20.3 11.3 17 7.43 22.3
257.57 0.752 5.29 0.278 0.442 2.18 -- -- -0.445 20.3 11.01 10 7.5 22.3
265.06 0.758 5.29 0.118 -- 2.28 -- -1.56 -0.487 -- 9.819 24 7.35 22.2
329.81 0.851 5.27 0.636 1.06 -- -0.458 -- -0.33 17.4 -- -- -- --
330.3 0.851 5.27 0.637 1.06 -- -- -- -0.332 17.5 -- -- -- --
266.16 0.76 5.28 0.216 -- 2.35 -- -- -0.46 -- 10.35 45 7.4 21.8
259.22 0.75 5.31 -- 0.452 2.2 -- -- -0.501 20.7 12.32 10 7.53 22.3
388.22 0.921 5.25 0.601 -- -- -- -- -0.358 -- -- -- -- --
340.98 0.864 5.28 -- 1.04 -- -- -- -0.403 17.5 -- -- -- --
267.69 0.762 5.29 -- -- 2.37 -- -- -0.492 -- 9.471 46 7.42 21.8
397.76 0.931 5.27 -- -- -- -- -- -0.425 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 260.27 temperature 15.0 30 > th dose dependent rect. 7 22
12 270.50 temperature 30.0 90 < th dose dependent rect. 13 18
18 272.78 radiation 1.0 43200 < th dose dependent rect. 21 6
26 274.03 temperature 30.0 10 < th dose dependent rect. 12 20
27 274.24 wind 9.0 43200 > th dose dependent rect. 18 12
33 274.61 temperature 25.0 1440 > th dose independent rect. 7 1
39 274.94 temperature 25.0 1440 < th dose independent rect. 7 1
42 275.34 radiation 1.0 43200 < th dose dependent rect. 24 3
43 275.41 temperature 15.0 90 > th dose dependent rect. 7 18
63 277.05 wind 9.0 43200 > th dose independent rect. 18 12
77 277.80 temperature 25.0 1440 > th dose dependent rect. 8 1
87 278.18 wind 9.0 43200 > th dose independent rect. 18 4
88 278.21 wind 7.0 43200 > th dose dependent rect. 18 3
92 278.42 radiation 1.0 90 > th dose independent rect. 7 12
105 278.55 wind 9.0 43200 < th dose independent rect. 18 12
112 278.99 temperature 30.0 90 < th dose dependent rect. 17 14
123 279.39 wind 9.0 43200 < th dose independent rect. 18 3
132 279.65 wind 7.0 43200 > th dose independent rect. 13 19
133 279.65 wind 7.0 43200 < th dose independent rect. 13 19
134 279.66 wind 9.0 43200 > th dose dependent rect. 18 5
146 279.89 radiation 1.0 720 < th dose dependent sin 17 NA
153 280.00 wind 5.0 43200 > th dose dependent rect. 11 11
155 280.03 temperature 30.0 270 < th dose independent rect. 9 22
163 280.19 wind 7.0 43200 < th dose independent rect. 4 17
171 280.27 wind 7.0 43200 < th dose independent rect. 12 9
177 280.32 wind 7.0 43200 > th dose independent rect. 4 17
187 280.46 wind 7.0 43200 < th dose independent rect. 24 21
195 280.55 wind 5.0 43200 > th dose dependent rect. 13 18
214 280.67 wind 7.0 43200 > th dose independent rect. 12 9
227 280.73 wind 5.0 43200 > th dose dependent sin 18 NA
258 280.90 wind 7.0 43200 < th dose independent sin 18 NA
259 280.90 wind 9.0 43200 > th dose independent rect. 18 7
265 280.93 wind 9.0 43200 > th dose dependent rect. 18 7
313 281.16 precipitation 0.1 4320 > th dose dependent rect. 11 7
320 281.21 wind 5.0 43200 > th dose dependent rect. 5 16
326 281.24 wind 7.0 43200 > th dose independent sin 18 NA
346 281.32 temperature 30.0 720 < th dose independent rect. 10 20
347 281.33 temperature 25.0 1440 > th dose independent rect. 19 1
385 281.50 temperature 25.0 1440 < th dose independent rect. 19 1
394 281.53 precipitation 0.1 4320 > th dose dependent rect. 13 5
405 281.61 radiation 20.0 4320 > th dose dependent rect. 16 1
468 281.82 temperature 25.0 1440 > th dose dependent rect. 3 6
470 281.83 radiation 1.0 720 > th dose independent rect. 17 16
484 281.88 temperature 30.0 720 < th dose independent rect. 11 10
532 282.03 temperature 20.0 720 > th dose dependent rect. 16 2
537 282.05 temperature 25.0 720 > th dose dependent rect. 14 21
584 282.21 wind 9.0 43200 < th dose independent rect. 18 7
589 282.23 temperature 30.0 720 < th dose independent rect. 15 15
632 282.32 precipitation 0.1 4320 > th dose dependent rect. 8 10
647 282.38 wind 5.0 43200 > th dose independent rect. 9 16
752 282.54 wind 7.0 43200 < th dose independent rect. 13 3
772 282.61 wind 7.0 43200 < th dose independent no NA NA
788 282.64 wind 5.0 43200 > th dose dependent rect. 13 2
791 282.65 wind 7.0 43200 > th dose independent no NA NA
817 282.71 wind 9.0 90 < th dose dependent rect. 7 22
860 282.83 wind 7.0 43200 > th dose independent rect. 20 23
861 282.83 wind 7.0 43200 < th dose independent rect. 20 23
902 282.94 wind 5.0 43200 > th dose dependent rect. 12 4
937 283.05 wind 7.0 43200 > th dose independent rect. 13 3
955 283.10 wind 7.0 43200 > th dose independent rect. 18 23
956 283.10 wind 7.0 43200 < th dose independent rect. 18 23