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Os02g0148100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : MAP kinase MAPK2 (MAP kinase 3).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.4 (0.0155) R2 : 0.00481
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0484 (0.0326) R2dN8 : 0.00621 R2N8 : 0.00481
σ : 0.291
deviance : 38.99
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
17.6 0.197 12.9 0.663 0.514 -40.1 0.469 -86.7 -0.12 6.35 15 1461 -- --
19.27 0.206 12.4 -0.418 0.515 0.965 0.453 -- -0.108 6.27 15 1461 -- --
18.14 0.198 12.9 0.662 0.517 -40.1 -- -86.6 -0.12 6.29 15.01 1440 -- --
18.21 0.2 12.4 -0.455 0.519 1.03 -- -- -0.12 6.24 15.4 274 -- --
31.84 0.263 13 0.802 -- -39.6 -- -85.6 -0.108 -- 15.1 1733 -- --
21.09 0.215 12.4 -0.381 0.517 -- 0.443 -- -0.0982 6.34 -- -- -- --
21.56 0.217 12.4 -0.376 0.519 -- -- -- -0.0998 6.26 -- -- -- --
32.16 0.264 12.4 -0.44 -- 1.01 -- -- -0.109 -- 15.3 273 -- --
23.41 0.227 12.4 -- 0.513 0.756 -- -- -0.0664 6.29 15.4 274 -- --
35.54 0.279 12.4 -0.362 -- -- -- -- -0.0885 -- -- -- -- --
25.29 0.235 12.4 -- 0.514 -- -- -- -0.058 6.3 -- -- -- --
37.05 0.284 12.4 -- -- 0.768 -- -- -0.057 -- 15.3 251 -- --
38.99 0.291 12.4 -- -- -- -- -- -0.0484 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 16.78 humidity 50.0 43200 > th dose independent rect. 1 7
2 16.78 humidity 70.0 43200 < th dose dependent rect. 23 8
4 16.81 humidity 50.0 43200 < th dose dependent rect. 8 1
8 16.85 humidity 60.0 43200 > th dose independent rect. 22 9
10 16.86 humidity 50.0 43200 < th dose dependent rect. 20 13
32 16.97 humidity 50.0 43200 < th dose independent rect. 4 4
33 16.97 humidity 60.0 43200 < th dose independent rect. 22 9
34 16.97 humidity 50.0 43200 < th dose independent rect. 21 11
43 17.01 temperature 15.0 720 > th dose independent rect. 4 18
45 17.02 humidity 60.0 43200 > th dose independent rect. 23 6
50 17.05 humidity 50.0 43200 < th dose independent rect. 19 13
54 17.08 temperature 15.0 1440 > th dose independent rect. 7 3
71 17.12 humidity 70.0 43200 > th dose independent rect. 1 1
74 17.13 humidity 60.0 43200 < th dose independent rect. 22 7
81 17.15 humidity 90.0 720 > th dose dependent rect. 9 6
85 17.16 humidity 70.0 43200 < th dose independent rect. 24 6
88 17.17 humidity 90.0 720 > th dose independent rect. 9 7
93 17.18 humidity 90.0 720 < th dose independent rect. 10 6
97 17.19 temperature 15.0 4320 > th dose independent rect. 7 1
101 17.20 humidity 70.0 43200 < th dose dependent rect. 24 4
102 17.21 humidity 70.0 43200 < th dose independent rect. 1 1
108 17.21 humidity 50.0 43200 < th dose dependent rect. 21 8
114 17.23 humidity 50.0 43200 > th dose independent rect. 1 4
127 17.25 temperature 15.0 1440 > th dose independent rect. 10 21
133 17.26 humidity 50.0 43200 > th dose independent rect. 19 12
134 17.26 temperature 15.0 1440 > th dose independent rect. 12 19
139 17.27 temperature 15.0 1440 > th dose independent rect. 17 12
146 17.28 temperature 15.0 1440 > th dose independent rect. 17 14
152 17.29 temperature 15.0 1440 > th dose independent rect. 14 15
156 17.29 humidity 50.0 43200 < th dose dependent rect. 19 3
169 17.30 temperature 15.0 1440 > th dose independent rect. 14 17
171 17.31 humidity 90.0 1440 > th dose independent rect. 9 5
186 17.33 precipitation 0.1 1440 < th dose independent rect. 7 3
194 17.33 precipitation 0.1 1440 < th dose dependent rect. 7 3
203 17.35 atmosphere 1015.0 1440 < th dose independent rect. 1 4
204 17.35 atmosphere 1015.0 1440 < th dose independent rect. 1 6
209 17.36 humidity 90.0 1440 < th dose independent rect. 9 1
210 17.36 precipitation 0.1 1440 > th dose independent rect. 2 1
218 17.36 precipitation 0.1 1440 > th dose dependent rect. 2 1
231 17.38 temperature 15.0 1440 > th dose independent rect. 1 21
232 17.38 humidity 80.0 1440 > th dose dependent rect. 9 4
237 17.39 humidity 90.0 1440 > th dose independent rect. 9 1
239 17.39 humidity 90.0 720 > th dose independent rect. 11 3
272 17.42 humidity 80.0 1440 > th dose dependent rect. 9 2
273 17.43 precipitation 0.1 1440 > th dose independent rect. 9 1
277 17.43 precipitation 0.1 1440 > th dose dependent rect. 9 1
280 17.44 precipitation 0.1 1440 < th dose independent rect. 9 1
282 17.44 precipitation 0.1 1440 > th dose independent rect. 9 4
289 17.44 precipitation 0.1 1440 < th dose dependent rect. 9 1
291 17.44 precipitation 0.1 1440 > th dose dependent rect. 9 4
322 17.47 temperature 15.0 1440 > th dose independent rect. 23 23
323 17.48 precipitation 0.1 1440 > th dose independent rect. 6 1
331 17.48 precipitation 0.1 1440 > th dose dependent rect. 6 1
339 17.49 temperature 15.0 270 > th dose independent rect. 1 23
342 17.50 temperature 15.0 1440 > th dose independent sin 13 NA
354 17.51 precipitation 0.1 1440 > th dose independent rect. 6 7
358 17.51 precipitation 0.1 1440 > th dose dependent rect. 6 7
363 17.52 precipitation 0.1 720 > th dose independent rect. 5 11
365 17.52 temperature 15.0 720 > th dose independent rect. 10 14
366 17.52 temperature 15.0 720 > th dose independent rect. 5 15
382 17.54 temperature 15.0 4320 > th dose independent rect. 3 2
384 17.54 temperature 15.0 1440 > th dose independent rect. 1 4
386 17.54 precipitation 0.1 720 > th dose independent rect. 6 9
396 17.55 humidity 50.0 43200 < th dose independent rect. 19 2
408 17.56 temperature 15.0 1440 > th dose independent rect. 1 6
411 17.56 temperature 15.0 1440 > th dose independent rect. 12 23
424 17.57 temperature 20.0 720 < th dose dependent rect. 10 8
430 17.59 temperature 15.0 90 > th dose independent sin 7 NA
431 17.59 temperature 15.0 270 > th dose independent sin 9 NA
433 17.59 temperature 15.0 270 > th dose independent sin 21 NA
434 17.59 radiation 1.0 1440 > th dose independent rect. 9 1
436 17.59 radiation 1.0 1440 < th dose independent rect. 9 2
446 17.59 radiation 1.0 1440 < th dose dependent rect. 9 2
451 17.60 temperature 15.0 90 > th dose independent sin 19 NA
452 17.60 temperature 15.0 1440 > th dose independent no NA NA
458 17.60 temperature 15.0 1440 > th dose independent rect. 7 10
462 17.60 temperature 15.0 1440 > th dose independent rect. 17 22
464 17.60 wind 9.0 1440 > th dose dependent rect. 11 1
469 17.61 temperature 15.0 720 > th dose independent sin 23 NA
475 17.61 radiation 1.0 1440 > th dose independent rect. 9 3
481 17.61 precipitation 0.1 1440 < th dose independent rect. 6 6
487 17.61 temperature 15.0 270 > th dose independent rect. 10 23
488 17.61 temperature 15.0 1440 > th dose independent rect. 14 23
497 17.61 precipitation 0.1 1440 < th dose dependent rect. 6 6
522 17.63 precipitation 0.1 720 > th dose dependent rect. 6 10
529 17.64 precipitation 0.1 1440 > th dose independent rect. 6 4
533 17.64 temperature 15.0 1440 > th dose independent rect. 23 8
542 17.64 precipitation 0.1 1440 > th dose dependent rect. 6 4
562 17.66 atmosphere 1015.0 1440 < th dose independent rect. 24 1
570 17.66 temperature 15.0 1440 > th dose independent rect. 2 13
576 17.66 temperature 15.0 1440 < th dose independent rect. 4 20
594 17.66 temperature 15.0 1440 < th dose dependent rect. 4 16
607 17.67 temperature 15.0 1440 < th dose independent rect. 19 10
617 17.67 temperature 15.0 1440 < th dose independent rect. 4 18
621 17.67 temperature 15.0 1440 < th dose independent rect. 10 19
638 17.67 temperature 15.0 1440 > th dose independent rect. 6 23
640 17.67 temperature 15.0 1440 < th dose dependent sin 9 NA
643 17.67 temperature 15.0 1440 < th dose dependent rect. 22 7
645 17.67 temperature 15.0 1440 < th dose dependent rect. 21 10
654 17.68 temperature 15.0 1440 < th dose independent sin 12 NA
682 17.68 temperature 15.0 1440 > th dose independent rect. 14 21
704 17.68 temperature 20.0 1440 < th dose dependent rect. 10 4
737 17.69 temperature 15.0 1440 < th dose independent no NA NA
738 17.69 radiation 10.0 270 < th dose independent rect. 9 1
759 17.69 temperature 15.0 1440 < th dose independent rect. 17 22
768 17.69 temperature 15.0 1440 < th dose dependent sin 23 NA
793 17.70 temperature 15.0 1440 < th dose independent sin 22 NA
800 17.70 atmosphere 1015.0 1440 > th dose independent rect. 24 4
826 17.70 temperature 15.0 1440 > th dose independent rect. 17 18
852 17.70 atmosphere 1015.0 1440 > th dose dependent rect. 24 2
877 17.71 temperature 15.0 90 > th dose independent no NA NA
879 17.71 temperature 15.0 90 < th dose independent sin 7 NA
929 17.71 temperature 15.0 90 < th dose independent no NA NA
932 17.71 temperature 15.0 1440 < th dose independent rect. 5 1
934 17.71 temperature 15.0 1440 < th dose independent rect. 9 1
937 17.71 atmosphere 1015.0 1440 > th dose independent rect. 1 1
975 17.71 temperature 15.0 1440 < th dose independent rect. 22 4