Os02g0147200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os02g0147200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.4 | 0.31 | 10.1 | -2.12 | 1.15 | -0.466 | -0.18 | 1.11 | -0.431 | 5.96 | 24.18 | 10 | -- | -- |
| 45.42 | 0.316 | 10.1 | -1.98 | 1.15 | -0.583 | -0.0322 | -- | -0.401 | 5.89 | 24.09 | 10 | -- | -- |
| 43.46 | 0.309 | 10.1 | -2.12 | 1.15 | -0.477 | -- | 1.07 | -0.43 | 5.94 | 24.15 | 10 | -- | -- |
| 44.07 | 0.309 | 10.1 | -2.03 | 1.14 | -1.14 | -- | -- | -0.371 | 6.11 | 19.33 | 164 | -- | -- |
| 110.31 | 0.492 | 10.1 | -1.97 | -- | -0.218 | -- | 2 | -0.332 | -- | 19.7 | 9 | -- | -- |
| 50.23 | 0.332 | 10.1 | -1.84 | 1.13 | -- | -0.141 | -- | -0.307 | 6.23 | -- | -- | -- | -- |
| 50.28 | 0.332 | 10.1 | -1.84 | 1.13 | -- | -- | -- | -0.306 | 6.21 | -- | -- | -- | -- |
| 110.76 | 0.49 | 10.1 | -2 | -- | -1.3 | -- | -- | -0.351 | -- | 18.37 | 38 | -- | -- |
| 139.68 | 0.553 | 10 | -- | 1.1 | 0.218 | -- | -- | -0.094 | 6.33 | 19.33 | 164 | -- | -- |
| 116.52 | 0.504 | 10.1 | -1.81 | -- | -- | -- | -- | -0.282 | -- | -- | -- | -- | -- |
| 139.94 | 0.553 | 10 | -- | 1.1 | -- | -- | -- | -0.101 | 6.3 | -- | -- | -- | -- |
| 172.01 | 0.611 | 9.99 | -- | -- | 1.32 | -- | -- | 0.114 | -- | 31.2 | 389 | -- | -- |
| 203.26 | 0.665 | 10 | -- | -- | -- | -- | -- | -0.0803 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.07 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 9 | 8 |
| 3 | 42.21 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 8 | 9 |
| 4 | 42.33 | temperature | 15.0 | 720 | > th | dose independent | rect. | 9 | 20 |
| 11 | 42.59 | temperature | 15.0 | 720 | > th | dose independent | rect. | 18 | 18 |
| 16 | 42.65 | radiation | 10.0 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 30 | 42.66 | temperature | 15.0 | 270 | > th | dose independent | rect. | 18 | 23 |
| 32 | 42.71 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 51 | 42.89 | temperature | 15.0 | 1440 | > th | dose independent | sin | 22 | NA |
| 60 | 42.99 | temperature | 15.0 | 720 | > th | dose independent | rect. | 16 | 14 |
| 63 | 43.00 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 17 | 19 |
| 71 | 43.09 | temperature | 15.0 | 270 | > th | dose independent | sin | 21 | NA |
| 75 | 43.10 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 76 | 43.10 | temperature | 15.0 | 270 | > th | dose independent | rect. | 21 | 17 |
| 77 | 43.10 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 80 | 43.12 | temperature | 15.0 | 90 | > th | dose independent | sin | 19 | NA |
| 81 | 43.13 | temperature | 15.0 | 270 | > th | dose independent | sin | 7 | NA |
| 83 | 43.13 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 4 | 22 |
| 92 | 43.17 | temperature | 15.0 | 90 | > th | dose independent | rect. | 23 | 17 |
| 98 | 43.20 | temperature | 15.0 | 720 | > th | dose independent | rect. | 21 | 23 |
| 104 | 43.24 | humidity | 90.0 | 720 | < th | dose independent | rect. | 9 | 4 |
| 117 | 43.31 | temperature | 15.0 | 720 | > th | dose independent | rect. | 4 | 16 |
| 118 | 43.31 | temperature | 15.0 | 270 | > th | dose independent | rect. | 24 | 23 |
| 145 | 43.41 | temperature | 15.0 | 720 | > th | dose independent | rect. | 7 | 15 |
| 147 | 43.41 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 7 | 10 |
| 151 | 43.42 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 14 | 22 |
| 153 | 43.45 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 155 | 43.45 | temperature | 15.0 | 720 | > th | dose independent | rect. | 18 | 10 |
| 192 | 43.52 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 196 | 43.53 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 199 | 43.55 | temperature | 25.0 | 10 | < th | dose dependent | no | NA | NA |
| 200 | 43.55 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 210 | 43.57 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 223 | 43.59 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 233 | 43.61 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 234 | 43.62 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 250 | 43.65 | temperature | 15.0 | 720 | > th | dose independent | rect. | 24 | 21 |
| 320 | 43.73 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 6 |
| 321 | 43.73 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 24 | 7 |
| 343 | 43.76 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 9 | 22 |
| 358 | 43.78 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 24 | 15 |
| 367 | 43.79 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 11 | 14 |
| 370 | 43.80 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 23 |
| 378 | 43.80 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 389 | 43.82 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 393 | 43.82 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 8 | 5 |
| 395 | 43.82 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 9 | 15 |
| 400 | 43.83 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 410 | 43.84 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 9 | 17 |
| 412 | 43.84 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 9 | 18 |
| 421 | 43.85 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 423 | 43.85 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 492 | 43.89 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 495 | 43.89 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 506 | 43.90 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 11 | 15 |
| 543 | 43.92 | temperature | 20.0 | 90 | < th | dose dependent | sin | 18 | NA |
| 573 | 43.94 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 575 | 43.94 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 23 | 18 |
| 684 | 44.01 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 697 | 44.02 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 10 | 3 |
| 729 | 44.06 | temperature | 15.0 | 720 | > th | dose independent | sin | 14 | NA |
| 730 | 44.06 | precipitation | 0.1 | 720 | < th | dose independent | sin | 1 | NA |
| 732 | 44.06 | temperature | 15.0 | 720 | > th | dose independent | rect. | 24 | 15 |
| 734 | 44.06 | precipitation | 0.1 | 720 | < th | dose dependent | sin | 1 | NA |
| 743 | 44.07 | temperature | 15.0 | 720 | > th | dose independent | sin | 11 | NA |
| 824 | 44.12 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 4 | 13 |
| 838 | 44.13 | radiation | 40.0 | 10 | < th | dose independent | rect. | 16 | 21 |
| 840 | 44.13 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 4 | 11 |
| 843 | 44.13 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 3 | 16 |
| 855 | 44.14 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 9 | 3 |
| 857 | 44.14 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 11 | 13 |
| 886 | 44.16 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 23 | 13 |
| 944 | 44.19 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 950 | 44.19 | temperature | 15.0 | 4320 | < th | dose dependent | sin | 2 | NA |
| 951 | 44.19 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 5 | 7 |