Os02g0145600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0145600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.03 | 0.415 | 10.8 | -1.4 | 1.56 | -0.227 | -1.16 | 8.91 | 0.563 | 16.2 | 29.93 | 1696 | -- | -- |
| 86.39 | 0.433 | 10.7 | -0.0223 | 1.52 | 0.694 | -0.625 | -- | 0.629 | 16.4 | 30.4 | 1757 | -- | -- |
| 81.61 | 0.421 | 10.8 | -1.38 | 1.57 | -0.208 | -- | 8.95 | 0.56 | 16.2 | 29.95 | 1745 | -- | -- |
| 87.42 | 0.435 | 10.6 | 0.119 | 1.61 | 0.825 | -- | -- | 0.666 | 16.3 | 29.9 | 1791 | -- | -- |
| 206.82 | 0.67 | 10.8 | -1.66 | -- | -0.193 | -- | 9.08 | 0.561 | -- | 29.98 | 2755 | -- | -- |
| 104.91 | 0.48 | 10.6 | -0.077 | 1.59 | -- | -1.13 | -- | 0.771 | 16.1 | -- | -- | -- | -- |
| 108.48 | 0.488 | 10.6 | -0.0896 | 1.58 | -- | -- | -- | 0.765 | 16.2 | -- | -- | -- | -- |
| 214.03 | 0.681 | 10.6 | 0.0872 | -- | 0.717 | -- | -- | 0.565 | -- | 30.2 | 1274 | -- | -- |
| 87.7 | 0.436 | 10.6 | -- | 1.61 | 0.794 | -- | -- | 0.674 | 16.3 | 29.8 | 1789 | -- | -- |
| 243.87 | 0.73 | 10.6 | -0.153 | -- | -- | -- | -- | 0.722 | -- | -- | -- | -- | -- |
| 108.69 | 0.488 | 10.6 | -- | 1.58 | -- | -- | -- | 0.775 | 16.1 | -- | -- | -- | -- |
| 213.91 | 0.681 | 10.6 | -- | -- | 0.746 | -- | -- | 0.57 | -- | 30.26 | 1276 | -- | -- |
| 244.49 | 0.73 | 10.6 | -- | -- | -- | -- | -- | 0.739 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.87 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 3 | 74.10 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 6 | 74.49 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 20 |
| 14 | 75.99 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 18 |
| 15 | 76.03 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 13 |
| 24 | 76.18 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 40 | 77.12 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 41 | 77.21 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 43 | 77.44 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 21 |
| 45 | 77.54 | temperature | 30.0 | 270 | < th | dose independent | rect. | 20 | 17 |
| 49 | 77.86 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 15 | 18 |
| 50 | 77.98 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 80 | 78.68 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 96 | 79.23 | humidity | 50.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 100 | 79.40 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 15 | 21 |
| 106 | 79.50 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 8 |
| 112 | 79.56 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 21 |
| 114 | 79.59 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 116 | 79.65 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 118 | 79.67 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 120 | 79.69 | humidity | 50.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 121 | 79.69 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 22 | 16 |
| 123 | 79.70 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 1 | 13 |
| 127 | 79.71 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 129 | 79.71 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 3 | 11 |
| 139 | 79.78 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 15 | 21 |
| 141 | 79.79 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 8 | 9 |
| 180 | 79.93 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 21 |
| 183 | 79.94 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 7 | 10 |
| 184 | 79.94 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 12 |
| 196 | 79.97 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 19 |
| 206 | 80.02 | temperature | 30.0 | 1440 | > th | dose independent | sin | 1 | NA |
| 212 | 80.04 | temperature | 30.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 221 | 80.04 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 7 | 16 |
| 224 | 80.04 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 18 |
| 239 | 80.05 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 16 |
| 251 | 80.06 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 7 | 14 |
| 296 | 80.08 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 7 | 23 |
| 297 | 80.08 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 23 |
| 300 | 80.09 | temperature | 30.0 | 1440 | < th | dose independent | no | NA | NA |
| 330 | 80.11 | temperature | 30.0 | 1440 | > th | dose independent | no | NA | NA |
| 493 | 80.17 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 12 | 4 |
| 530 | 80.23 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 12 | 4 |
| 552 | 80.28 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 561 | 80.28 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 4 |
| 578 | 80.30 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 10 | 4 |
| 581 | 80.32 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 584 | 80.33 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 15 | 8 |
| 592 | 80.37 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 15 | 6 |
| 618 | 80.44 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 15 | 15 |
| 619 | 80.44 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 656 | 80.55 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 18 |
| 687 | 80.61 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 5 |
| 690 | 80.61 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 21 |
| 743 | 80.69 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 749 | 80.70 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 756 | 80.70 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 15 | 3 |
| 817 | 80.83 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 15 | 3 |
| 891 | 81.01 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 9 |
| 892 | 81.01 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 16 |
| 899 | 81.02 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 12 |