Os02g0143200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Armadillo-like helical domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0143200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Armadillo-like helical domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 153.32 | 0.582 | 6.73 | -0.557 | 0.523 | 0.531 | -1.12 | -0.863 | -0.33 | 8.64 | 1006 | 20 | -- | -- |
| 157.75 | 0.585 | 6.73 | -0.551 | 0.493 | 0.523 | -1.19 | -- | -0.292 | 8.89 | 1006 | 49 | -- | -- |
| 155.25 | 0.58 | 6.73 | -0.589 | 0.574 | 0.511 | -- | -0.989 | -0.336 | 7.73 | 1006 | 72 | -- | -- |
| 161.27 | 0.591 | 6.73 | -0.598 | 0.529 | 0.496 | -- | -- | -0.287 | 7.95 | 1006 | 63 | -- | -- |
| 169.86 | 0.607 | 6.74 | -0.598 | -- | 0.606 | -- | -1.01 | -0.329 | -- | 1006 | 241 | -- | -- |
| 180.17 | 0.629 | 6.67 | -0.577 | 0.605 | -- | -0.834 | -- | -0.0441 | 8.24 | -- | -- | -- | -- |
| 181.67 | 0.631 | 6.67 | -0.606 | 0.625 | -- | -- | -- | -0.0464 | 7.6 | -- | -- | -- | -- |
| 175.23 | 0.617 | 6.75 | -0.589 | -- | 0.589 | -- | -- | -0.312 | -- | 1006 | 240 | -- | -- |
| 170.46 | 0.608 | 6.71 | -- | 0.533 | 0.514 | -- | -- | -0.237 | 7.88 | 1006 | 94 | -- | -- |
| 202.61 | 0.665 | 6.69 | -0.597 | -- | -- | -- | -- | -0.0369 | -- | -- | -- | -- | -- |
| 191.36 | 0.647 | 6.65 | -- | 0.62 | -- | -- | -- | 0.0212 | 7.66 | -- | -- | -- | -- |
| 184.4 | 0.632 | 6.73 | -- | -- | 0.596 | -- | -- | -0.255 | -- | 1006 | 202 | -- | -- |
| 212.02 | 0.68 | 6.67 | -- | -- | -- | -- | -- | 0.0294 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 146.21 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 4 | 19 |
| 6 | 147.37 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 5 | 18 |
| 7 | 147.56 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 5 | 20 |
| 12 | 147.97 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 15 | 148.29 | atmosphere | 1005 | 10 | > th | dose dependent | sin | 20 | NA |
| 54 | 149.89 | temperature | 25 | 270 | < th | dose independent | rect. | 19 | 17 |
| 69 | 150.19 | temperature | 25 | 270 | < th | dose independent | rect. | 17 | 19 |
| 70 | 150.19 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 75 | 150.31 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 5 | 12 |
| 85 | 150.43 | atmosphere | 1005 | 720 | > th | dose dependent | rect. | 4 | 11 |
| 87 | 150.48 | atmosphere | 1005 | 720 | > th | dose dependent | rect. | 3 | 13 |
| 93 | 150.59 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 5 | 15 |
| 95 | 150.59 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 3 | 20 |
| 193 | 151.75 | temperature | 25 | 270 | > th | dose independent | rect. | 23 | 21 |
| 198 | 151.78 | atmosphere | 1005 | 720 | > th | dose dependent | sin | 2 | NA |
| 205 | 151.89 | atmosphere | 1015 | 10 | < th | dose dependent | sin | 18 | NA |
| 214 | 151.95 | temperature | 15 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 215 | 151.96 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 9 | 12 |
| 249 | 152.21 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 11 | 12 |
| 287 | 152.48 | atmosphere | 1005 | 10 | > th | dose independent | sin | 22 | NA |
| 302 | 152.58 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 310 | 152.63 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 383 | 153.26 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 22 |
| 436 | 153.52 | atmosphere | 995 | 720 | > th | dose dependent | rect. | 3 | 12 |
| 517 | 154.00 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 531 | 154.05 | temperature | 30 | 270 | < th | dose dependent | rect. | 16 | 21 |
| 585 | 154.31 | atmosphere | 1005 | 10 | < th | dose independent | rect. | 1 | 21 |
| 612 | 154.41 | atmosphere | 1005 | 720 | > th | dose dependent | rect. | 5 | 1 |
| 620 | 154.44 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 629 | 154.47 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 9 | 18 |
| 654 | 154.60 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 11 | 23 |
| 719 | 154.85 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 736 | 154.91 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 22 | 23 |
| 778 | 155.03 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 24 | 23 |
| 780 | 155.04 | atmosphere | 1005 | 720 | > th | dose dependent | rect. | 11 | 2 |
| 797 | 155.10 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 804 | 155.14 | atmosphere | 1005 | 720 | > th | dose independent | rect. | 3 | 3 |
| 819 | 155.20 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 23 |
| 820 | 155.20 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 8 | 11 |
| 839 | 155.27 | atmosphere | 1000 | 10 | > th | dose dependent | rect. | 5 | 8 |
| 856 | 155.33 | atmosphere | 995 | 720 | > th | dose dependent | rect. | 20 | 19 |
| 872 | 155.37 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 900 | 155.47 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 10 | 12 |
| 904 | 155.48 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 23 |
| 935 | 155.58 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 14 | 23 |
| 944 | 155.62 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 969 | 155.69 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 8 | 14 |
| 983 | 155.74 | atmosphere | 1000 | 720 | > th | dose dependent | rect. | 3 | 3 |
| 998 | 155.78 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 9 | 14 |