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Os02g0140200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Beta-amyrin synthase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.47 (0.0278) R2 : 0.522
β1 : -1.88 (0.102) R2dD : 0.371 R2D : 0.414
β2 : 0.518 (0.069) R2dC : 0.0591 R2C : 0.0517
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.363 (0.0593) R2dN8 : 0.0526 R2N8 : 0.0851
σ : 0.523
deviance : 124.55
__
_____
C
peak time of C : 15
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
112.02 0.497 8.53 -2.28 0.658 0.0849 0.161 4.5 0.275 15.6 29.6 259 -- --
114.37 0.498 8.49 -1.87 0.686 0.603 0.019 -- 0.285 15.5 30.3 239 -- --
112.08 0.493 8.53 -2.27 0.656 0.0904 -- 4.36 0.278 15.6 29.6 256 -- --
114.02 0.497 8.48 -1.79 0.693 0.683 -- -- 0.311 15.6 30.37 239 -- --
132.45 0.536 8.52 -2.32 -- 0.116 -- 3.68 0.33 -- 28.81 829 -- --
124.03 0.522 8.47 -1.87 0.52 -- -0.4 -- 0.366 15.1 -- -- -- --
124.55 0.523 8.47 -1.88 0.518 -- -- -- 0.363 15 -- -- -- --
133.23 0.538 8.49 -1.86 -- 0.372 -- -- 0.239 -- 29.9 2958 -- --
198.58 0.656 8.46 -- 0.565 0.797 -- -- 0.42 15.6 30.6 1895 -- --
139.92 0.553 8.47 -1.9 -- -- -- -- 0.35 -- -- -- -- --
217.77 0.69 8.42 -- 0.555 -- -- -- 0.573 15 -- -- -- --
143.28 0.558 8.31 -- -- 1.41 -- -- 1.05 -- 22.09 47520 -- --
235.42 0.716 8.42 -- -- -- -- -- 0.561 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 108.90 humidity 60.0 270 > th dose independent rect. 9 18
3 109.19 temperature 30.0 270 < th dose independent rect. 9 18
4 109.39 humidity 60.0 270 > th dose independent rect. 8 20
5 109.54 temperature 30.0 270 < th dose independent rect. 8 20
6 109.55 atmosphere 1010.0 10 < th dose independent rect. 20 10
13 109.89 temperature 15.0 10 > th dose independent rect. 20 10
15 110.08 temperature 30.0 90 < th dose independent rect. 9 7
17 110.22 atmosphere 1010.0 30 < th dose independent rect. 9 21
18 110.29 temperature 15.0 270 > th dose independent rect. 18 10
21 110.42 humidity 60.0 270 > th dose independent rect. 8 7
24 110.49 temperature 15.0 270 > th dose independent rect. 9 17
30 110.64 temperature 30.0 270 < th dose independent rect. 13 23
34 110.71 temperature 15.0 270 > th dose independent rect. 17 22
39 110.83 temperature 15.0 90 > th dose independent rect. 9 21
42 110.91 wind 9.0 43200 > th dose dependent rect. 18 1
44 110.98 humidity 70.0 270 < th dose independent rect. 15 2
45 111.01 temperature 15.0 10 > th dose independent rect. 9 21
51 111.04 temperature 10.0 10 > th dose dependent rect. 20 10
67 111.46 humidity 90.0 14400 > th dose independent rect. 13 1
70 111.53 temperature 15.0 270 > th dose independent rect. 7 21
73 111.58 humidity 90.0 90 < th dose independent rect. 9 7
74 111.60 precipitation 0.1 14400 > th dose independent rect. 5 10
78 111.68 precipitation 0.1 14400 < th dose independent rect. 5 10
80 111.68 precipitation 0.1 14400 < th dose dependent rect. 5 10
82 111.71 temperature 15.0 90 > th dose independent rect. 9 7
89 111.83 temperature 30.0 270 < th dose independent rect. 18 22
90 111.84 humidity 90.0 14400 < th dose independent rect. 12 2
94 111.87 atmosphere 1010.0 90 < th dose independent rect. 20 19
98 111.89 precipitation 0.1 14400 < th dose independent rect. 14 1
100 111.89 precipitation 0.1 14400 < th dose dependent rect. 14 1
105 111.97 precipitation 0.1 14400 > th dose independent rect. 14 1
107 111.97 temperature 15.0 90 > th dose independent rect. 20 19
108 111.97 precipitation 0.1 14400 > th dose dependent rect. 14 1
111 112.00 precipitation 0.1 14400 > th dose dependent rect. 5 10
112 112.02 atmosphere 995.0 10 > th dose independent rect. 9 8
121 112.11 wind 3.0 43200 > th dose dependent rect. 3 4
123 112.14 humidity 60.0 270 > th dose independent rect. 17 22
127 112.16 humidity 80.0 43200 > th dose dependent rect. 10 3
129 112.18 wind 3.0 43200 > th dose dependent rect. 4 2
133 112.20 precipitation 0.1 14400 > th dose independent rect. 9 7
140 112.21 wind 9.0 10 < th dose independent rect. 9 8
141 112.21 humidity 50.0 30 > th dose independent rect. 9 8
143 112.22 wind 9.0 43200 > th dose independent rect. 18 1
146 112.24 atmosphere 995.0 10 > th dose independent rect. 17 16
148 112.25 temperature 25.0 14400 > th dose independent rect. 1 14
149 112.25 temperature 25.0 14400 > th dose independent rect. 24 16
158 112.28 humidity 90.0 10 < th dose dependent rect. 15 18
161 112.29 temperature 25.0 14400 < th dose independent rect. 1 14
172 112.33 humidity 90.0 14400 > th dose independent rect. 12 4
174 112.33 temperature 30.0 270 < th dose independent rect. 2 23
178 112.34 atmosphere 1010.0 30 < th dose independent rect. 9 17
190 112.36 precipitation 0.1 10 < th dose independent rect. 17 16
194 112.36 precipitation 0.1 10 < th dose dependent rect. 17 16
196 112.37 atmosphere 995.0 90 > th dose independent rect. 9 7
220 112.43 radiation 10.0 10 < th dose independent rect. 20 10
225 112.44 wind 9.0 90 < th dose independent rect. 9 7
249 112.49 precipitation 0.1 43200 > th dose dependent rect. 13 4
250 112.50 precipitation 0.1 14400 < th dose independent rect. 8 8
253 112.50 precipitation 0.1 14400 < th dose dependent rect. 8 8
264 112.53 temperature 25.0 14400 > th dose independent sin 4 NA
273 112.54 humidity 50.0 30 > th dose independent rect. 9 21
289 112.56 atmosphere 995.0 10 > th dose dependent rect. 17 16
295 112.57 temperature 30.0 270 < th dose independent rect. 18 10
302 112.58 humidity 90.0 10 < th dose independent rect. 9 8
306 112.59 temperature 25.0 14400 < th dose independent sin 4 NA
319 112.61 humidity 90.0 14400 > th dose dependent rect. 19 10
334 112.64 atmosphere 995.0 90 > th dose independent rect. 16 17
339 112.65 humidity 90.0 43200 < th dose independent rect. 9 2
347 112.65 radiation 10.0 4320 < th dose dependent rect. 7 4
367 112.67 precipitation 0.1 43200 > th dose dependent rect. 5 7
377 112.69 humidity 80.0 270 < th dose dependent rect. 15 2
379 112.70 precipitation 0.1 43200 < th dose independent rect. 5 7
380 112.70 precipitation 0.1 43200 < th dose dependent rect. 5 7
386 112.72 precipitation 0.1 14400 < th dose independent rect. 5 5
387 112.72 atmosphere 1010.0 90 < th dose independent rect. 9 7
392 112.72 precipitation 0.1 14400 < th dose dependent rect. 5 5
398 112.73 temperature 30.0 14400 < th dose dependent rect. 12 1
410 112.75 temperature 15.0 14400 > th dose dependent rect. 12 1
412 112.75 precipitation 0.1 14400 > th dose dependent rect. 8 7
414 112.76 precipitation 0.1 43200 > th dose independent rect. 13 4
418 112.76 wind 3.0 43200 > th dose dependent rect. 23 9
421 112.77 precipitation 0.1 43200 > th dose independent rect. 5 7
422 112.77 temperature 10.0 10 > th dose independent rect. 9 8
424 112.77 atmosphere 1015.0 10 < th dose independent rect. 9 8
425 112.77 precipitation 0.1 10 < th dose independent rect. 9 8
427 112.77 temperature 10.0 10 > th dose independent rect. 17 16
428 112.77 humidity 90.0 14400 > th dose dependent rect. 13 3
431 112.77 precipitation 0.1 10 < th dose dependent rect. 9 8
433 112.78 temperature 30.0 14400 < th dose dependent rect. 10 1
446 112.80 temperature 30.0 14400 < th dose dependent rect. 9 4
452 112.81 temperature 30.0 270 < th dose independent rect. 9 14
454 112.81 temperature 30.0 270 > th dose independent rect. 18 23
462 112.82 wind 9.0 1440 < th dose independent rect. 9 1
466 112.82 humidity 70.0 270 > th dose independent rect. 18 10
467 112.82 temperature 15.0 270 > th dose independent rect. 21 16
474 112.83 temperature 30.0 270 < th dose independent no NA NA
484 112.84 precipitation 0.1 43200 < th dose independent rect. 7 2
487 112.84 precipitation 0.1 43200 < th dose dependent rect. 7 2
488 112.84 temperature 15.0 14400 > th dose dependent rect. 10 3
508 112.86 humidity 90.0 43200 > th dose independent rect. 9 2
512 112.86 temperature 15.0 14400 > th dose dependent rect. 10 1
533 112.88 precipitation 0.1 43200 < th dose independent rect. 13 4
543 112.88 precipitation 0.1 43200 < th dose dependent rect. 13 4
566 112.90 wind 1.0 43200 < th dose dependent rect. 5 1
642 112.95 radiation 40.0 720 > th dose independent rect. 8 1
704 112.97 radiation 20.0 10 < th dose dependent rect. 20 10
711 112.98 radiation 1.0 4320 > th dose independent rect. 6 13
726 112.99 wind 9.0 43200 < th dose independent rect. 18 1
741 113.00 temperature 30.0 270 > th dose independent rect. 10 23
802 113.05 radiation 40.0 90 < th dose independent rect. 16 17
813 113.05 radiation 1.0 1440 < th dose dependent rect. 18 22
827 113.07 temperature 30.0 270 > th dose independent sin 21 NA
846 113.08 temperature 30.0 270 > th dose independent no NA NA
848 113.08 temperature 30.0 270 > th dose independent rect. 10 9
850 113.08 temperature 30.0 270 > th dose independent rect. 8 11
864 113.08 temperature 30.0 270 < th dose independent rect. 7 14
993 113.10 precipitation 0.1 90 < th dose independent rect. 9 7
994 113.10 wind 1.0 10 > th dose independent rect. 9 8