Os02g0135900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0135900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.08 | 0.41 | 11.6 | -0.683 | 1.66 | -1.29 | 0.831 | -0.889 | -0.42 | 9.07 | 62.76 | 918 | -- | -- |
| 76.72 | 0.408 | 11.6 | -0.795 | 1.58 | -1.34 | 0.426 | -- | -0.424 | 9.31 | 57.84 | 998 | -- | -- |
| 77.58 | 0.41 | 11.6 | -0.717 | 1.59 | -1.24 | -- | -0.233 | -0.432 | 9.23 | 60.57 | 969 | -- | -- |
| 77.39 | 0.41 | 11.6 | -0.754 | 1.47 | -1.26 | -- | -- | -0.39 | 9.34 | 55.02 | 1047 | -- | -- |
| 165.96 | 0.6 | 11.6 | -0.591 | -- | -0.685 | -- | -0.815 | -0.415 | -- | 58.48 | 2905 | -- | -- |
| 102.2 | 0.474 | 11.6 | -0.72 | 1.15 | -- | 0.381 | -- | -0.352 | 8.7 | -- | -- | -- | -- |
| 102.68 | 0.475 | 11.6 | -0.707 | 1.15 | -- | -- | -- | -0.351 | 8.71 | -- | -- | -- | -- |
| 154.6 | 0.579 | 11.6 | -0.73 | -- | -1.04 | -- | -- | -0.418 | -- | 60.16 | 1437 | -- | -- |
| 91.4 | 0.445 | 11.6 | -- | 1.64 | -1.2 | -- | -- | -0.394 | 9.06 | 70.82 | 888 | -- | -- |
| 177.93 | 0.623 | 11.6 | -0.705 | -- | -- | -- | -- | -0.342 | -- | -- | -- | -- | -- |
| 115.85 | 0.503 | 11.6 | -- | 1.15 | -- | -- | -- | -0.273 | 8.76 | -- | -- | -- | -- |
| 168.46 | 0.604 | 11.6 | -- | -- | -1.03 | -- | -- | -0.347 | -- | 61.46 | 1459 | -- | -- |
| 191.03 | 0.645 | 11.6 | -- | -- | -- | -- | -- | -0.264 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.54 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 2 | 72.55 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 5 | 73.30 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 9 | 73.90 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 9 |
| 10 | 73.92 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 11 |
| 29 | 74.54 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 11 |
| 30 | 74.56 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 53 | 74.85 | humidity | 90 | 720 | > th | dose dependent | rect. | 8 | 17 |
| 59 | 74.94 | humidity | 80 | 1440 | > th | dose independent | sin | 0 | NA |
| 61 | 74.94 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 174 | 76.47 | humidity | 90 | 720 | > th | dose dependent | sin | 20 | NA |
| 198 | 76.70 | humidity | 60 | 720 | > th | dose dependent | sin | 17 | NA |
| 202 | 76.71 | humidity | 90 | 720 | > th | dose dependent | rect. | 18 | 6 |
| 216 | 76.81 | humidity | 90 | 720 | > th | dose dependent | rect. | 19 | 4 |
| 235 | 76.92 | humidity | 70 | 1440 | > th | dose dependent | sin | 23 | NA |
| 333 | 77.47 | humidity | 60 | 720 | > th | dose dependent | rect. | 14 | 12 |
| 348 | 77.56 | humidity | 90 | 720 | > th | dose independent | rect. | 7 | 17 |
| 368 | 77.63 | humidity | 50 | 720 | > th | dose dependent | rect. | 14 | 14 |
| 456 | 77.94 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 20 |
| 462 | 77.96 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 13 |
| 469 | 77.97 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 11 |
| 472 | 77.97 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 18 |
| 474 | 77.98 | radiation | 1 | 1440 | < th | dose independent | sin | 22 | NA |
| 502 | 78.06 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 503 | 78.06 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 20 |
| 512 | 78.08 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 18 |
| 513 | 78.08 | radiation | 1 | 1440 | < th | dose dependent | sin | 22 | NA |
| 514 | 78.08 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 552 | 78.15 | humidity | 60 | 720 | > th | dose dependent | rect. | 15 | 8 |
| 582 | 78.24 | radiation | 1 | 1440 | > th | dose independent | rect. | 7 | 12 |
| 595 | 78.25 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 596 | 78.25 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 18 |
| 600 | 78.26 | radiation | 1 | 1440 | > th | dose independent | sin | 22 | NA |
| 611 | 78.27 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 16 |
| 640 | 78.29 | humidity | 70 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 729 | 78.47 | humidity | 60 | 720 | > th | dose dependent | rect. | 15 | 6 |
| 758 | 78.50 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 862 | 78.63 | humidity | 60 | 720 | > th | dose dependent | rect. | 11 | 22 |
| 869 | 78.64 | humidity | 60 | 720 | > th | dose dependent | rect. | 14 | 22 |
| 870 | 78.64 | humidity | 70 | 720 | > th | dose dependent | rect. | 9 | 23 |
| 880 | 78.67 | humidity | 60 | 720 | > th | dose dependent | rect. | 14 | 20 |
| 937 | 78.75 | humidity | 70 | 720 | > th | dose dependent | rect. | 1 | 22 |