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Os02g0133100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Phosphatidylinositol transfer-like protein III.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.9 (0.0156) R2 : 0.355
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.58 (0.0373) R2dC : 0.342 R2C : 0.341
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0919 (0.0328) R2dN8 : 0.0143 R2N8 : 0.0127
σ : 0.294
deviance : 39.58
__
_____
C
peak time of C : 12.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
29.16 0.254 13 -0.409 0.849 -1.05 -1.23 0.936 -0.192 8.15 1.79 688 -- --
30.07 0.255 12.9 -0.379 0.8 -0.945 -0.929 -- -0.186 8.43 1.8 685 -- --
31.57 0.264 13 -0.376 0.372 -0.185 -- 0.775 -0.143 13.6 1.31 619 -- --
32.11 0.264 12.9 -0.42 0.86 -1.09 -- -- -0.17 7.54 1.557 635 -- --
30.57 0.257 13 -0.323 -- -0.441 -- 0.82 -0.126 -- 3.863 94 -- --
32.92 0.269 13 -0.335 0.57 -- -0.859 -- -0.129 12.6 -- -- -- --
36.03 0.281 13 -0.367 0.574 -- -- -- -0.133 12.8 -- -- -- --
33.98 0.271 13 -0.388 -- -0.496 -- -- -0.192 -- 2.29 130 -- --
36.72 0.282 12.9 -- 0.858 -1.08 -- -- -0.157 7.62 1.62 644 -- --
56.59 0.351 13 -0.388 -- -- -- -- -0.143 -- -- -- -- --
39.58 0.294 12.9 -- 0.58 -- -- -- -0.0919 12.8 -- -- -- --
37.64 0.286 13 -- -- -0.491 -- -- -0.117 -- 3.77 131 -- --
60.56 0.363 13 -- -- -- -- -- -0.1 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 26.22 temperature 30.0 90 < th dose dependent rect. 16 14
15 26.57 temperature 25.0 90 < th dose independent rect. 15 15
16 26.57 temperature 20.0 270 > th dose dependent rect. 18 7
21 26.72 temperature 25.0 270 < th dose independent rect. 13 16
51 27.02 radiation 1.0 720 < th dose dependent rect. 17 2
84 27.29 temperature 25.0 720 < th dose independent rect. 17 2
85 27.29 radiation 1.0 720 < th dose dependent rect. 6 14
120 27.50 radiation 1.0 720 < th dose dependent rect. 13 7
123 27.52 radiation 1.0 720 < th dose dependent rect. 11 9
143 27.61 temperature 25.0 270 > th dose independent rect. 18 7
154 27.66 radiation 10.0 30 > th dose independent rect. 11 23
162 27.70 radiation 1.0 720 < th dose independent rect. 7 13
172 27.74 wind 1.0 30 < th dose independent rect. 10 1
173 27.74 temperature 10.0 1440 > th dose independent rect. 11 1
177 27.74 atmosphere 995.0 1440 > th dose independent rect. 11 1
180 27.74 precipitation 0.1 1440 < th dose independent rect. 11 1
182 27.74 temperature 10.0 1440 > th dose independent rect. 12 23
185 27.74 wind 1.0 30 < th dose dependent rect. 10 1
186 27.74 temperature 25.0 30 > th dose dependent rect. 10 1
187 27.74 precipitation 0.1 1440 < th dose dependent rect. 11 1
197 27.76 humidity 70.0 30 < th dose independent rect. 10 1
202 27.77 radiation 30.0 30 < th dose independent rect. 10 1
206 27.78 temperature 25.0 30 > th dose independent rect. 10 1
207 27.78 atmosphere 1010.0 30 < th dose independent rect. 10 1
214 27.80 radiation 1.0 720 > th dose independent rect. 11 19
219 27.81 humidity 80.0 30 < th dose dependent rect. 10 1
232 27.84 humidity 60.0 30 > th dose independent rect. 10 1
241 27.85 radiation 40.0 30 < th dose dependent rect. 10 1
245 27.86 radiation 1.0 720 < th dose independent rect. 15 5
248 27.86 temperature 30.0 720 < th dose dependent rect. 17 2
250 27.87 wind 1.0 30 > th dose independent rect. 10 1
252 27.87 temperature 10.0 30 > th dose independent rect. 10 1
254 27.87 temperature 30.0 30 < th dose independent rect. 10 1
258 27.87 atmosphere 995.0 30 > th dose independent rect. 10 1
259 27.87 atmosphere 1005.0 30 > th dose independent rect. 10 1
261 27.87 radiation 1.0 30 > th dose independent rect. 10 1
263 27.87 precipitation 0.1 30 < th dose independent rect. 10 1
268 27.87 temperature 10.0 30 > th dose independent rect. 11 23
269 27.87 atmosphere 995.0 30 > th dose dependent rect. 10 1
272 27.87 precipitation 0.1 30 < th dose dependent rect. 10 1
279 27.89 atmosphere 1015.0 30 < th dose dependent rect. 10 1
289 27.93 radiation 1.0 30 > th dose dependent rect. 10 1
292 27.94 radiation 1.0 720 < th dose independent rect. 13 7
300 27.96 radiation 1.0 720 < th dose independent rect. 11 9
312 27.99 temperature 25.0 720 > th dose independent rect. 13 9
322 28.01 wind 9.0 30 < th dose independent rect. 11 23
323 28.01 atmosphere 995.0 30 > th dose independent rect. 11 23
328 28.02 temperature 20.0 720 > th dose dependent rect. 13 10
330 28.03 humidity 50.0 30 > th dose dependent rect. 10 1
340 28.04 radiation 1.0 720 > th dose independent rect. 13 17
346 28.04 temperature 10.0 720 > th dose dependent rect. 13 10
349 28.05 radiation 1.0 720 > th dose independent rect. 11 8
362 28.06 temperature 25.0 270 > th dose independent sin 14 NA
363 28.06 radiation 1.0 720 < th dose independent rect. 17 2
366 28.06 temperature 20.0 10 > th dose dependent rect. 20 7
368 28.06 radiation 1.0 720 < th dose dependent rect. 17 10
374 28.08 wind 1.0 30 > th dose dependent rect. 10 1
418 28.17 precipitation 0.1 30 < th dose independent rect. 11 23
423 28.17 precipitation 0.1 30 < th dose dependent rect. 11 23
429 28.19 radiation 1.0 720 < th dose dependent rect. 16 12
458 28.27 temperature 25.0 270 < th dose independent sin 14 NA
488 28.31 temperature 10.0 720 > th dose dependent rect. 11 12
490 28.32 radiation 1.0 720 > th dose independent sin 14 NA
559 28.39 radiation 20.0 30 < th dose dependent rect. 1 23
560 28.40 radiation 1.0 720 > th dose independent rect. 13 6
569 28.40 radiation 1.0 720 < th dose independent rect. 15 13
572 28.40 radiation 1.0 720 < th dose independent rect. 1 17
574 28.41 radiation 1.0 720 < th dose independent sin 23 NA
583 28.42 radiation 1.0 720 < th dose independent rect. 23 20
604 28.45 temperature 25.0 720 > th dose dependent rect. 12 16
621 28.47 radiation 1.0 720 < th dose independent rect. 16 11
624 28.47 radiation 10.0 43200 < th dose dependent rect. 21 7
633 28.49 temperature 25.0 720 > th dose dependent rect. 13 3
653 28.51 temperature 10.0 30 > th dose dependent rect. 11 23
673 28.55 radiation 1.0 720 < th dose independent rect. 3 16
723 28.59 temperature 25.0 720 > th dose independent sin 18 NA
770 28.62 radiation 10.0 43200 < th dose dependent rect. 1 1
823 28.66 radiation 1.0 720 < th dose dependent sin 23 NA
858 28.69 radiation 10.0 43200 < th dose dependent rect. 21 5
866 28.70 temperature 10.0 90 > th dose dependent rect. 11 14
878 28.72 temperature 25.0 720 < th dose independent sin 19 NA
914 28.74 temperature 20.0 90 > th dose dependent sin 12 NA
922 28.74 radiation 1.0 720 < th dose dependent rect. 3 16
924 28.75 temperature 30.0 720 > th dose independent rect. 13 2