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Os02g0133000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.9 (0.0197) R2 : 0.456
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.693 (0.0469) R2dC : 0.261 R2C : 0.196
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.54 (0.0415) R2dN8 : 0.26 R2N8 : 0.195
σ : 0.372
deviance : 63.26
__
_____
C
peak time of C : 12.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
43.87 0.311 9.99 -1.03 0.706 0.726 -0.0198 -1.04 0.251 12.1 19.5 3433 -- --
43.92 0.309 9.96 -0.933 0.721 1.12 -0.0132 -- 0.288 12.1 18.56 3557 -- --
43.87 0.308 9.99 -1.03 0.706 0.727 -- -1.04 0.251 12.1 19.49 3429 -- --
43.92 0.309 9.96 -0.933 0.719 1.12 -- -- 0.287 12.1 18.55 3557 -- --
74.12 0.401 10 -0.99 -- 0.756 -- -0.888 0.257 -- 19.3 3107 -- --
59.43 0.361 9.91 -0.381 0.688 -- -0.00709 -- 0.497 12.1 -- -- -- --
59.43 0.361 9.91 -0.381 0.688 -- -- -- 0.497 12.1 -- -- -- --
74.7 0.404 9.94 -0.599 -- 0.677 -- -- 0.393 -- 19.3 3107 -- --
61 0.364 9.92 -- 0.703 0.499 -- -- 0.488 11.7 17.1 5665 -- --
89.27 0.441 9.92 -0.403 -- -- -- -- 0.487 -- -- -- -- --
63.26 0.372 9.9 -- 0.693 -- -- -- 0.54 12.1 -- -- -- --
81.39 0.422 9.94 -- -- 0.445 -- -- 0.432 -- 21.6 3034 -- --
93.54 0.451 9.91 -- -- -- -- -- 0.532 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 40.22 atmosphere 1015 43200 > th dose independent rect. 13 5
4 40.25 atmosphere 1015 43200 < th dose independent rect. 14 4
6 40.26 atmosphere 1015 43200 < th dose independent rect. 13 6
15 40.35 atmosphere 1015 43200 > th dose independent rect. 14 1
20 40.38 radiation 40 43200 < th dose dependent rect. 2 3
30 40.55 radiation 30 14400 > th dose independent rect. 7 1
58 40.62 atmosphere 1015 43200 < th dose independent rect. 17 3
62 40.70 humidity 90 14400 > th dose dependent rect. 5 1
64 40.71 radiation 30 14400 > th dose dependent rect. 7 1
82 40.72 atmosphere 1015 43200 > th dose dependent rect. 13 1
85 40.78 radiation 40 43200 < th dose dependent rect. 19 10
109 40.92 radiation 30 43200 < th dose dependent rect. 21 8
111 40.93 radiation 1 43200 < th dose dependent rect. 19 10
120 40.95 radiation 40 14400 < th dose independent rect. 22 10
121 40.96 radiation 40 14400 < th dose independent rect. 6 2
124 40.97 atmosphere 1015 43200 > th dose dependent rect. 12 4
125 40.97 radiation 1 43200 < th dose dependent rect. 23 6
129 40.98 wind 3 43200 > th dose independent rect. 13 1
135 40.98 radiation 40 14400 < th dose independent rect. 17 15
153 41.00 radiation 40 14400 < th dose independent rect. 1 7
184 41.12 atmosphere 1015 43200 > th dose dependent rect. 11 10
219 41.29 atmosphere 1015 43200 > th dose dependent rect. 18 4
226 41.33 wind 1 43200 > th dose independent rect. 2 1
233 41.35 radiation 10 43200 < th dose independent rect. 13 1
241 41.37 atmosphere 1015 43200 > th dose dependent rect. 20 1
273 41.44 humidity 90 14400 > th dose independent rect. 23 2
277 41.45 humidity 90 14400 < th dose independent rect. 23 2
285 41.48 radiation 1 43200 < th dose independent rect. 18 11
291 41.50 wind 3 43200 < th dose independent rect. 13 1
299 41.54 temperature 15 43200 > th dose independent rect. 13 1
315 41.55 temperature 15 43200 < th dose independent rect. 13 1
347 41.61 radiation 1 14400 > th dose independent rect. 18 1
350 41.61 radiation 1 14400 < th dose independent rect. 18 3
362 41.61 atmosphere 1015 43200 > th dose dependent sin 17 NA
375 41.63 radiation 1 14400 < th dose independent rect. 18 9
389 41.66 radiation 1 43200 > th dose dependent rect. 18 11
418 41.78 humidity 90 43200 > th dose dependent rect. 13 1
419 41.79 radiation 20 43200 < th dose independent rect. 2 4
423 41.80 temperature 15 43200 < th dose independent rect. 6 1
435 41.84 radiation 1 43200 > th dose dependent rect. 18 1
463 41.89 wind 3 43200 < th dose dependent rect. 11 1
465 41.90 temperature 15 43200 > th dose independent rect. 17 1
500 41.96 wind 5 43200 < th dose dependent rect. 13 1
519 41.97 atmosphere 1015 43200 > th dose dependent rect. 23 1
540 42.00 wind 3 43200 > th dose independent rect. 11 4
543 42.00 temperature 15 43200 > th dose independent rect. 10 8
553 42.02 atmosphere 1015 43200 > th dose independent sin 20 NA
571 42.04 temperature 15 43200 < th dose independent rect. 10 5
582 42.05 radiation 1 14400 < th dose dependent rect. 18 13
598 42.07 atmosphere 1015 43200 < th dose independent sin 21 NA
602 42.07 radiation 10 43200 < th dose independent rect. 17 13
612 42.09 temperature 15 43200 < th dose independent rect. 17 1
625 42.10 wind 7 43200 > th dose dependent rect. 5 1
626 42.10 radiation 1 14400 < th dose dependent rect. 18 21
648 42.13 temperature 15 43200 < th dose independent rect. 5 10
653 42.14 temperature 15 43200 > th dose independent rect. 10 1
655 42.14 temperature 20 1440 < th dose independent rect. 5 2
658 42.14 temperature 15 43200 < th dose independent rect. 10 8
663 42.15 wind 7 43200 < th dose independent rect. 24 1
664 42.15 temperature 15 43200 < th dose independent rect. 10 1
673 42.15 temperature 15 43200 < th dose independent rect. 5 15
678 42.16 wind 3 43200 < th dose independent rect. 11 4
686 42.16 temperature 15 43200 < th dose independent rect. 5 13
689 42.16 wind 1 43200 > th dose dependent rect. 14 1
706 42.17 temperature 15 43200 < th dose dependent rect. 2 1
710 42.18 radiation 10 43200 < th dose independent rect. 10 4
723 42.19 temperature 15 43200 < th dose independent rect. 5 6
728 42.19 temperature 15 43200 > th dose independent rect. 6 14
758 42.21 wind 7 43200 > th dose independent rect. 24 1
785 42.22 temperature 15 43200 < th dose independent sin 23 NA
792 42.22 temperature 15 43200 < th dose independent rect. 13 5
798 42.22 temperature 15 43200 > th dose independent rect. 6 9
807 42.23 temperature 15 43200 > th dose independent sin 22 NA
812 42.23 atmosphere 1015 14400 > th dose independent rect. 18 6
813 42.23 atmosphere 1015 14400 < th dose independent rect. 18 6
829 42.24 wind 7 43200 > th dose independent rect. 5 1
843 42.24 atmosphere 995 43200 > th dose dependent rect. 23 1
860 42.25 wind 7 43200 > th dose dependent rect. 24 1
883 42.26 wind 5 43200 < th dose dependent rect. 11 4
926 42.28 atmosphere 1015 43200 < th dose dependent rect. 23 1
942 42.29 temperature 15 43200 < th dose independent rect. 13 10
950 42.29 radiation 1 14400 < th dose dependent sin 12 NA
960 42.30 radiation 1 14400 > th dose independent rect. 10 2