Os02g0131400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Beta-D-glucan exohydrolase, isoenzyme ExoII (EC 3.2.1.58).
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Os02g0131400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Beta-D-glucan exohydrolase, isoenzyme ExoII (EC 3.2.1.58).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 216.74 | 0.692 | 2.95 | -0.0882 | 0.11 | 0.507 | -0.0386 | 1.67 | 0.0421 | 8.54 | 1015 | 3891 | -- | -- |
| 221.5 | 0.693 | 2.93 | 0.168 | 0.0952 | 0.445 | -0.157 | -- | 0.111 | 8.44 | 1014 | 5254 | -- | -- |
| 216.74 | 0.686 | 2.95 | -0.0898 | 0.11 | 0.506 | -- | 1.67 | 0.0421 | 8.71 | 1015 | 3892 | -- | -- |
| 221.56 | 0.693 | 2.93 | 0.165 | 0.0985 | 0.444 | -- | -- | 0.113 | 9.13 | 1014 | 5254 | -- | -- |
| 217.42 | 0.687 | 2.95 | -0.0902 | -- | 0.504 | -- | 1.67 | 0.0448 | -- | 1015 | 3858 | -- | -- |
| 229.36 | 0.71 | 2.95 | 0.102 | 0.0687 | -- | -0.386 | -- | 0.0303 | 6.34 | -- | -- | -- | -- |
| 229.44 | 0.709 | 2.95 | 0.0995 | 0.095 | -- | -- | -- | 0.0327 | 9.42 | -- | -- | -- | -- |
| 222.14 | 0.694 | 2.93 | 0.162 | -- | 0.447 | -- | -- | 0.112 | -- | 1014 | 5254 | -- | -- |
| 222.27 | 0.694 | 2.94 | -- | 0.1 | 0.434 | -- | -- | 0.0914 | 9 | 1014 | 5254 | -- | -- |
| 229.96 | 0.709 | 2.95 | 0.099 | -- | -- | -- | -- | 0.033 | -- | -- | -- | -- | -- |
| 229.7 | 0.709 | 2.95 | -- | 0.095 | -- | -- | -- | 0.0216 | 9.35 | -- | -- | -- | -- |
| 222.82 | 0.695 | 2.94 | -- | -- | 0.435 | -- | -- | 0.0918 | -- | 1014 | 5258 | -- | -- |
| 230.22 | 0.708 | 2.96 | -- | -- | -- | -- | -- | 0.022 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 200.87 | humidity | 80.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 3 | 201.09 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 9 | 205.51 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 14 | 206.23 | wind | 5.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 15 | 206.23 | wind | 5.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 37 | 212.13 | wind | 5.0 | 270 | > th | dose independent | rect. | 24 | 3 |
| 59 | 213.50 | radiation | 20.0 | 30 | < th | dose independent | rect. | 9 | 1 |
| 64 | 213.61 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 68 | 213.79 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 9 | 1 |
| 74 | 213.86 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 1 |
| 75 | 213.86 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 1 |
| 156 | 214.65 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 162 | 214.97 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 9 | 4 |
| 175 | 215.39 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 21 | 14 |
| 176 | 215.40 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 10 | 7 |
| 179 | 215.43 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 8 | 9 |
| 181 | 215.48 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 6 |
| 190 | 215.56 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 9 |
| 204 | 216.13 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 205 | 216.14 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 208 | 216.17 | temperature | 25.0 | 10 | < th | dose independent | rect. | 10 | 1 |
| 210 | 216.21 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 8 | 1 |
| 214 | 216.22 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 23 | 6 |
| 216 | 216.25 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 23 | 6 |
| 218 | 216.28 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 23 | 4 |
| 219 | 216.32 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 223 | 216.36 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 23 | 4 |
| 230 | 216.44 | wind | 3.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 231 | 216.46 | wind | 7.0 | 1440 | < th | dose independent | rect. | 22 | 10 |
| 244 | 216.54 | wind | 3.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 258 | 216.67 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 271 | 216.77 | wind | 7.0 | 1440 | < th | dose independent | rect. | 22 | 6 |
| 279 | 216.81 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 18 | 8 |
| 281 | 216.81 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 18 | 8 |
| 291 | 216.90 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 19 | 2 |
| 313 | 217.00 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 316 | 217.01 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 324 | 217.03 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 8 | 3 |
| 334 | 217.09 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 19 | 3 |
| 335 | 217.09 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 19 | 3 |
| 358 | 217.16 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 385 | 217.23 | wind | 7.0 | 1440 | > th | dose independent | rect. | 21 | 11 |
| 388 | 217.23 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 21 | 12 |
| 414 | 217.31 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 24 | 7 |
| 416 | 217.32 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 5 | 3 |
| 418 | 217.32 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 24 | 7 |
| 435 | 217.36 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 12 | 1 |
| 436 | 217.36 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 19 | 7 |
| 458 | 217.40 | wind | 7.0 | 1440 | > th | dose independent | rect. | 21 | 8 |
| 474 | 217.41 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 1 | 5 |
| 478 | 217.44 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 18 | 8 |
| 486 | 217.46 | wind | 3.0 | 1440 | < th | dose independent | rect. | 23 | 4 |
| 490 | 217.47 | wind | 3.0 | 90 | < th | dose dependent | rect. | 8 | 2 |
| 529 | 217.53 | wind | 3.0 | 30 | < th | dose independent | rect. | 9 | 1 |
| 574 | 217.62 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 5 | 3 |
| 581 | 217.63 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 590 | 217.64 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 1 | 1 |
| 666 | 217.76 | atmosphere | 1015.0 | 4320 | > th | dose independent | sin | 9 | NA |
| 682 | 217.77 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 8 | 15 |
| 698 | 217.79 | atmosphere | 1015.0 | 4320 | < th | dose independent | sin | 8 | NA |
| 706 | 217.79 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 8 | 21 |
| 707 | 217.79 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 738 | 217.82 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 10 | 13 |
| 755 | 217.83 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 10 | 19 |
| 962 | 217.97 | atmosphere | 1015.0 | 4320 | > th | dose dependent | sin | 9 | NA |