Os02g0131000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0131000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 172.59 | 0.617 | 7.9 | 0.19 | 1.43 | -2.13 | 0.828 | 2.32 | 0.0734 | 18.3 | 25.18 | 89 | -- | -- |
| 181.11 | 0.627 | 7.86 | 0.516 | 1.42 | -2.33 | 0.56 | -- | 0.151 | 18.4 | 25.02 | 98 | -- | -- |
| 174.2 | 0.615 | 7.89 | 0.205 | 1.44 | -2.14 | -- | 2.16 | 0.0791 | 18.3 | 25.17 | 83 | -- | -- |
| 181.9 | 0.628 | 7.86 | 0.518 | 1.42 | -2.34 | -- | -- | 0.151 | 18.4 | 25 | 97 | -- | -- |
| 245.73 | 0.73 | 7.91 | -0.169 | -- | -2.82 | -- | 2.88 | -0.116 | -- | 29.66 | 262 | -- | -- |
| 260.02 | 0.756 | 7.75 | 1.08 | 1.65 | -- | 0.268 | -- | 0.608 | 17.5 | -- | -- | -- | -- |
| 260.19 | 0.755 | 7.75 | 1.08 | 1.66 | -- | -- | -- | 0.609 | 17.5 | -- | -- | -- | -- |
| 255.91 | 0.745 | 7.86 | 0.328 | -- | -2.85 | -- | -- | -0.0189 | -- | 28.6 | 255 | -- | -- |
| 184.34 | 0.632 | 7.84 | -- | 1.47 | -2.99 | -- | -- | 0.215 | 18.1 | 22.51 | 170 | -- | -- |
| 402.82 | 0.938 | 7.73 | 1.03 | -- | -- | -- | -- | 0.569 | -- | -- | -- | -- | -- |
| 291.16 | 0.798 | 7.78 | -- | 1.64 | -- | -- | -- | 0.488 | 17.5 | -- | -- | -- | -- |
| 258.58 | 0.749 | 7.87 | -- | -- | -2.94 | -- | -- | -0.0711 | -- | 28.49 | 254 | -- | -- |
| 430.75 | 0.969 | 7.75 | -- | -- | -- | -- | -- | 0.454 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 168.22 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 2 | 171.15 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 4 | 172.51 | temperature | 20.0 | 30 | > th | dose independent | rect. | 6 | 23 |
| 5 | 172.59 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 7 |
| 6 | 172.68 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 7 | 172.71 | temperature | 25.0 | 90 | < th | dose dependent | no | NA | NA |
| 8 | 172.77 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 10 | 172.94 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 11 | 173.02 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 13 | 173.27 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 17 | 173.49 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 19 | 173.70 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 26 | 174.28 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 2 |
| 29 | 174.50 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 30 | 174.53 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 40 | 174.70 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 42 | 174.80 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 45 | 174.85 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 48 | 175.00 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 54 | 175.48 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 23 |
| 56 | 175.59 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 75 | 176.17 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 2 |
| 83 | 176.44 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 90 | 176.64 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 102 | 177.01 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 107 | 177.20 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 143 | 178.61 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 184 | 180.29 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 13 |
| 187 | 180.39 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 9 |
| 212 | 180.99 | temperature | 20.0 | 720 | > th | dose independent | rect. | 6 | 19 |
| 215 | 181.08 | temperature | 20.0 | 270 | < th | dose independent | rect. | 9 | 23 |
| 219 | 181.13 | temperature | 20.0 | 270 | < th | dose independent | rect. | 23 | 23 |
| 233 | 181.49 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 4 | 11 |
| 266 | 181.90 | temperature | 20.0 | 270 | < th | dose independent | rect. | 21 | 23 |
| 278 | 182.10 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 290 | 182.24 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 23 |
| 306 | 182.44 | humidity | 90.0 | 43200 | < th | dose dependent | sin | 3 | NA |
| 319 | 182.60 | temperature | 20.0 | 270 | < th | dose independent | no | NA | NA |
| 330 | 182.69 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 23 |
| 331 | 182.70 | temperature | 20.0 | 270 | < th | dose independent | rect. | 13 | 23 |
| 336 | 182.73 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 347 | 182.87 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 22 | 16 |
| 372 | 183.08 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 374 | 183.09 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 380 | 183.12 | temperature | 20.0 | 270 | > th | dose independent | no | NA | NA |
| 383 | 183.12 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 7 | 5 |
| 390 | 183.16 | temperature | 20.0 | 270 | < th | dose independent | rect. | 18 | 23 |
| 404 | 183.33 | temperature | 20.0 | 270 | > th | dose independent | rect. | 14 | 23 |
| 463 | 183.65 | temperature | 20.0 | 270 | < th | dose independent | rect. | 6 | 23 |
| 480 | 183.78 | humidity | 70.0 | 43200 | > th | dose independent | sin | 6 | NA |
| 562 | 184.22 | temperature | 20.0 | 270 | < th | dose independent | rect. | 3 | 23 |
| 565 | 184.26 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 599 | 184.44 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 601 | 184.44 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 4 | 21 |
| 617 | 184.50 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 7 | 22 |
| 647 | 184.61 | humidity | 90.0 | 43200 | < th | dose dependent | no | NA | NA |
| 668 | 184.68 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 13 | 23 |
| 689 | 184.76 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 726 | 184.90 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 11 | 23 |
| 735 | 184.95 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 21 | 19 |
| 743 | 184.97 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 744 | 184.97 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 10 | 22 |
| 747 | 184.97 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 5 |
| 754 | 184.99 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 5 |
| 768 | 185.05 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 784 | 185.10 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 22 | 14 |
| 802 | 185.18 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 859 | 185.40 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 884 | 185.52 | wind | 7.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 901 | 185.60 | humidity | 70.0 | 43200 | < th | dose independent | sin | 10 | NA |
| 935 | 185.73 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 938 | 185.75 | wind | 5.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 954 | 185.82 | humidity | 70.0 | 43200 | > th | dose independent | no | NA | NA |
| 986 | 185.90 | humidity | 70.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 990 | 185.91 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 13 | 20 |