Os02g0129800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0129800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 404.33 | 0.945 | 12.1 | -1.01 | 2.75 | -0.97 | 3.36 | -2.95 | -0.841 | 11.4 | 0.9256 | 6763 | -- | -- |
| 402.6 | 0.935 | 12.1 | -0.58 | 2.78 | -1.44 | 3.46 | -- | -0.769 | 11.4 | 1.167 | 12706 | -- | -- |
| 449.16 | 0.987 | 12.1 | -0.879 | 2.76 | -1.12 | -- | -3.71 | -0.854 | 11.3 | 0.9678 | 7636 | -- | -- |
| 448.91 | 0.987 | 12 | -0.498 | 2.71 | -1.62 | -- | -- | -0.806 | 11.4 | 1 | 12405 | -- | -- |
| 904.67 | 1.4 | 12.2 | -0.849 | -- | -1.17 | -- | -3.77 | -0.838 | -- | 0.9571 | 5282 | -- | -- |
| 476.26 | 1.02 | 12 | -1.36 | 2.77 | -- | 3.49 | -- | -0.709 | 11.5 | -- | -- | -- | -- |
| 528.36 | 1.08 | 12 | -1.23 | 2.76 | -- | -- | -- | -0.698 | 11.3 | -- | -- | -- | -- |
| 913.45 | 1.41 | 12.1 | -0.367 | -- | -1.62 | -- | -- | -0.818 | -- | 0.7757 | 6238 | -- | -- |
| 454.39 | 0.993 | 12 | -- | 2.73 | -1.79 | -- | -- | -0.812 | 11.4 | 1 | 12380 | -- | -- |
| 1004.42 | 1.48 | 12.1 | -1.3 | -- | -- | -- | -- | -0.725 | -- | -- | -- | -- | -- |
| 568 | 1.11 | 12 | -- | 2.77 | -- | -- | -- | -0.561 | 11.4 | -- | -- | -- | -- |
| 917.25 | 1.41 | 12.1 | -- | -- | -2.08 | -- | -- | -0.832 | -- | 0.8488 | 6238 | -- | -- |
| 1048.78 | 1.51 | 12.1 | -- | -- | -- | -- | -- | -0.581 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 404.73 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 2 | 405.78 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 3 | 405.78 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 4 | 407.44 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 9 | 407.84 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 3 |
| 22 | 412.22 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 5 |
| 28 | 412.61 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 11 |
| 32 | 413.05 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 6 | 12 |
| 35 | 413.15 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 3 |
| 51 | 414.02 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 6 |
| 56 | 414.62 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 66 | 416.60 | temperature | 20.0 | 10 | > th | dose independent | rect. | 5 | 21 |
| 70 | 416.79 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 19 | 10 |
| 72 | 417.13 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 19 | 2 |
| 77 | 417.46 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 79 | 417.47 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 86 | 417.62 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 19 | 2 |
| 92 | 417.67 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 96 | 417.82 | wind | 7.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 106 | 418.11 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 118 | 418.36 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 119 | 418.36 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 143 | 418.75 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 16 | 5 |
| 152 | 418.82 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 156 | 418.83 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 18 | 11 |
| 165 | 419.02 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 2 |
| 174 | 419.08 | temperature | 20.0 | 720 | > th | dose independent | rect. | 20 | 4 |
| 182 | 419.22 | wind | 7.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 194 | 419.25 | temperature | 20.0 | 720 | > th | dose independent | rect. | 12 | 12 |
| 248 | 419.89 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 15 | 9 |
| 257 | 419.96 | temperature | 20.0 | 10 | > th | dose independent | rect. | 5 | 19 |
| 306 | 420.51 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 358 | 420.86 | atmosphere | 1000.0 | 14400 | < th | dose independent | sin | 4 | NA |
| 379 | 421.00 | atmosphere | 1000.0 | 14400 | > th | dose independent | sin | 4 | NA |
| 415 | 421.24 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 7 | 14 |
| 422 | 421.30 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 7 | 12 |
| 441 | 421.40 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 6 |
| 442 | 421.40 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 6 |
| 465 | 421.52 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 467 | 421.54 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 2 | 2 |
| 486 | 421.66 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 491 | 421.67 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 10 | 13 |
| 499 | 421.69 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 510 | 421.77 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 11 |
| 513 | 421.77 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 17 | 11 |
| 526 | 421.84 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 9 |
| 533 | 421.87 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 9 |
| 547 | 421.92 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 15 |
| 550 | 421.94 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 10 |
| 552 | 421.94 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 10 |
| 588 | 422.09 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 10 |
| 610 | 422.15 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 19 | 6 |
| 650 | 422.36 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 2 | 10 |
| 687 | 422.47 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 711 | 422.55 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 2 | 19 |
| 714 | 422.56 | precipitation | 0.1 | 720 | > th | dose dependent | sin | 17 | NA |
| 740 | 422.62 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 5 | 16 |
| 744 | 422.62 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 747 | 422.63 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 15 | 7 |
| 760 | 422.67 | temperature | 20.0 | 720 | > th | dose independent | rect. | 5 | 19 |
| 906 | 422.91 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 23 |
| 916 | 422.93 | atmosphere | 1000.0 | 14400 | < th | dose dependent | sin | 6 | NA |
| 930 | 422.95 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 17 | 4 |
| 955 | 423.01 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 8 |