Os02g0129600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : BZR1, transcriptional repressor family protein.
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Os02g0129600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : BZR1, transcriptional repressor family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.48 | 0.264 | 8.15 | 0.0723 | 0.379 | 0.462 | -1.34 | 1.44 | 0.254 | 16.9 | 10.43 | 10 | -- | -- |
| 31.99 | 0.263 | 8.17 | -0.111 | 0.331 | 0.469 | -1.19 | -- | 0.208 | 17.3 | 24.1 | 12 | -- | -- |
| 35.33 | 0.279 | 8.16 | -0.0289 | 0.399 | 0.384 | -- | 0.589 | 0.229 | 16.6 | 10.43 | 10 | -- | -- |
| 35.12 | 0.276 | 8.17 | -0.0887 | 0.371 | 0.352 | -- | -- | 0.219 | 16.5 | 24 | 2 | -- | -- |
| 38.98 | 0.291 | 8.2 | -0.344 | -- | 0.75 | -- | -1.89 | 0.148 | -- | 24.63 | 160 | -- | -- |
| 35.27 | 0.278 | 8.16 | -0.0282 | 0.504 | -- | -0.853 | -- | 0.266 | 16.5 | -- | -- | -- | -- |
| 37.07 | 0.285 | 8.16 | -0.0337 | 0.498 | -- | -- | -- | 0.262 | 16.1 | -- | -- | -- | -- |
| 40.04 | 0.295 | 8.17 | -0.152 | -- | 0.649 | -- | -- | 0.176 | -- | 24.1 | 13 | -- | -- |
| 35.32 | 0.277 | 8.17 | -- | 0.377 | 0.33 | -- | -- | 0.232 | 16.5 | 24.1 | 2 | -- | -- |
| 50.54 | 0.332 | 8.16 | -0.0539 | -- | -- | -- | -- | 0.249 | -- | -- | -- | -- | -- |
| 37.1 | 0.285 | 8.16 | -- | 0.498 | -- | -- | -- | 0.266 | 16.1 | -- | -- | -- | -- |
| 40.62 | 0.297 | 8.17 | -- | -- | 0.631 | -- | -- | 0.195 | -- | 24.1 | 23 | -- | -- |
| 50.62 | 0.332 | 8.16 | -- | -- | -- | -- | -- | 0.255 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.33 | temperature | 30.0 | 10 | < th | dose independent | rect. | 11 | 19 |
| 3 | 30.40 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 17 |
| 7 | 30.55 | temperature | 30.0 | 720 | < th | dose independent | rect. | 24 | 12 |
| 10 | 30.61 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 19 |
| 13 | 30.70 | temperature | 30.0 | 720 | < th | dose independent | rect. | 19 | 17 |
| 14 | 30.70 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 5 | 4 |
| 30 | 30.86 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 36 | 30.92 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 5 | 21 |
| 37 | 30.93 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 44 | 30.97 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 53 | 31.02 | temperature | 30.0 | 720 | < th | dose independent | rect. | 3 | 9 |
| 55 | 31.03 | temperature | 25.0 | 720 | > th | dose independent | rect. | 6 | 2 |
| 68 | 31.06 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 23 |
| 80 | 31.11 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 16 | 19 |
| 81 | 31.11 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 84 | 31.12 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 11 | 20 |
| 91 | 31.14 | temperature | 30.0 | 10 | < th | dose independent | rect. | 11 | 11 |
| 144 | 31.26 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 159 | 31.29 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 160 | 31.30 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 164 | 31.31 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 24 | 6 |
| 182 | 31.34 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 3 | 21 |
| 195 | 31.37 | temperature | 30.0 | 720 | < th | dose independent | rect. | 5 | 7 |
| 210 | 31.39 | radiation | 1.0 | 720 | < th | dose independent | rect. | 24 | 7 |
| 270 | 31.49 | temperature | 10.0 | 10 | > th | dose dependent | no | NA | NA |
| 275 | 31.49 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 282 | 31.51 | temperature | 30.0 | 720 | < th | dose independent | rect. | 9 | 3 |
| 283 | 31.51 | temperature | 30.0 | 10 | < th | dose independent | rect. | 11 | 7 |
| 284 | 31.51 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 21 |
| 286 | 31.51 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 11 |
| 311 | 31.54 | wind | 5.0 | 14400 | > th | dose independent | rect. | 20 | 19 |
| 313 | 31.54 | temperature | 30.0 | 10 | < th | dose dependent | no | NA | NA |
| 315 | 31.54 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 13 |
| 323 | 31.54 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 324 | 31.54 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 352 | 31.58 | wind | 5.0 | 14400 | < th | dose independent | rect. | 20 | 19 |
| 371 | 31.61 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 387 | 31.63 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 460 | 31.71 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 472 | 31.73 | radiation | 1.0 | 270 | > th | dose independent | rect. | 18 | 14 |
| 492 | 31.75 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 7 | 17 |
| 494 | 31.75 | wind | 1.0 | 30 | > th | dose independent | rect. | 12 | 23 |
| 497 | 31.75 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 7 | 17 |
| 501 | 31.76 | temperature | 20.0 | 10 | > th | dose dependent | sin | 6 | NA |
| 521 | 31.77 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 522 | 31.78 | temperature | 10.0 | 10 | > th | dose dependent | sin | 7 | NA |
| 532 | 31.80 | wind | 5.0 | 720 | < th | dose independent | rect. | 4 | 5 |
| 535 | 31.80 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 18 |
| 550 | 31.82 | wind | 1.0 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 577 | 31.84 | wind | 1.0 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 579 | 31.84 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 12 | 7 |
| 582 | 31.84 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 12 | 7 |
| 596 | 31.85 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 598 | 31.85 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 609 | 31.85 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 610 | 31.86 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 4 |
| 616 | 31.86 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 10 |
| 651 | 31.88 | wind | 5.0 | 270 | < th | dose dependent | rect. | 5 | 3 |
| 656 | 31.88 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 678 | 31.89 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 686 | 31.90 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 20 | 19 |
| 691 | 31.90 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 695 | 31.91 | temperature | 30.0 | 10 | < th | dose dependent | sin | 8 | NA |
| 696 | 31.91 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 5 | 2 |
| 702 | 31.91 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 19 |
| 725 | 31.93 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 11 |
| 742 | 31.94 | temperature | 15.0 | 720 | > th | dose dependent | sin | 5 | NA |
| 744 | 31.94 | wind | 9.0 | 720 | < th | dose dependent | rect. | 4 | 5 |
| 749 | 31.95 | temperature | 30.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 753 | 31.95 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 24 | 7 |
| 759 | 31.95 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 18 | 17 |
| 767 | 31.95 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 770 | 31.96 | temperature | 30.0 | 10 | < th | dose independent | rect. | 11 | 5 |
| 772 | 31.96 | radiation | 30.0 | 720 | < th | dose independent | rect. | 15 | 6 |
| 773 | 31.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 11 |
| 776 | 31.96 | temperature | 10.0 | 720 | > th | dose dependent | sin | 3 | NA |
| 781 | 31.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 11 |
| 812 | 31.98 | wind | 7.0 | 30 | < th | dose independent | rect. | 12 | 23 |
| 857 | 32.00 | wind | 5.0 | 270 | < th | dose dependent | rect. | 4 | 6 |
| 869 | 32.01 | humidity | 90.0 | 10 | < th | dose independent | rect. | 7 | 4 |
| 882 | 32.02 | temperature | 30.0 | 10 | < th | dose independent | rect. | 24 | 13 |
| 885 | 32.02 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 1 | 23 |
| 889 | 32.02 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 2 | 5 |
| 911 | 32.02 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 913 | 32.03 | wind | 9.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 915 | 32.03 | temperature | 25.0 | 10 | > th | dose independent | rect. | 5 | 18 |
| 918 | 32.03 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 18 | 11 |
| 931 | 32.04 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 5 | 19 |
| 945 | 32.04 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 5 | 19 |
| 952 | 32.05 | radiation | 30.0 | 720 | < th | dose independent | rect. | 15 | 15 |
| 963 | 32.05 | wind | 9.0 | 90 | < th | dose dependent | rect. | 6 | 13 |
| 988 | 32.06 | temperature | 25.0 | 30 | > th | dose independent | rect. | 1 | 22 |
| 993 | 32.06 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 5 | 6 |
| 996 | 32.06 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 11 |