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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0127400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.72 (0.0444) R2 : 0.361
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.773 (0.106) R2dC : 0.0747 R2C : 0.0812
β3 : 2.45 (0.18) R2dE : 0.269 R2E : 0.281
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.101 (0.094) R2dN8 : 0.00564 R2N8 : 0.0104
σ : 0.833
deviance : 319.86
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_____
C
peak time of C : 12.1
E
wheather : wind
threshold : 5.105
memory length : 5268
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 20.2
open length of G : 0.39

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
318.69 0.839 3.73 0.574 0.791 1.66 -0.147 4.02 -0.144 12.3 4.915 4519 20 1.05
316.64 0.829 3.75 0.589 0.814 2.26 0.0479 -- -0.0547 12.1 5.237 5273 20.1 0.549
318.78 0.832 3.73 0.571 0.791 1.66 -- 4.03 -0.144 12.3 4.914 4519 20 1.06
315.8 0.828 3.73 0.622 0.762 2.33 -- -- -0.0713 12.3 5.234 5368 20.1 0.548
355.21 0.878 3.74 0.503 -- 1.68 -- 3.92 -0.152 -- 5.148 3947 20.2 0.867
438.03 0.981 3.77 0.639 0.809 -- -0.116 -- -0.3 12.2 -- -- -- --
438.08 0.98 3.77 0.634 0.81 -- -- -- -0.3 12.3 -- -- -- --
352.56 0.875 3.75 0.493 -- 2.49 -- -- -0.14 -- 5.237 5419 20.2 0.5
319.86 0.833 3.72 -- 0.773 2.45 -- -- -0.101 12.1 5.105 5268 20.2 0.39
479.32 1.02 3.79 0.608 -- -- -- -- -0.313 -- -- -- -- --
448.69 0.991 3.79 -- 0.801 -- -- -- -0.371 12.2 -- -- -- --
353.32 0.875 3.76 -- -- 2.57 -- -- -0.181 -- 5.1 5827 20.2 0.3
489.06 1.03 3.8 -- -- -- -- -- -0.38 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 319.63 wind 5.0 4320 > th dose dependent rect. 20 1
3 322.10 wind 9.0 4320 > th dose dependent rect. 19 2
18 322.70 wind 9.0 4320 > th dose independent rect. 19 2
22 322.87 wind 9.0 4320 < th dose independent rect. 20 4
23 322.89 wind 7.0 4320 < th dose independent rect. 20 1
74 326.23 atmosphere 995.0 14400 < th dose independent rect. 16 1
80 326.41 atmosphere 995.0 14400 < th dose dependent rect. 16 1
115 327.28 atmosphere 995.0 14400 > th dose independent rect. 16 2
147 327.79 atmosphere 995.0 14400 > th dose independent rect. 15 5
160 327.82 atmosphere 995.0 14400 > th dose independent rect. 12 8
186 328.12 atmosphere 995.0 14400 > th dose independent rect. 8 12
202 328.29 precipitation 0.1 14400 > th dose dependent rect. 20 1
352 332.24 atmosphere 995.0 14400 < th dose dependent rect. 4 12
353 332.39 radiation 1.0 14400 < th dose dependent rect. 19 7
365 332.47 atmosphere 995.0 14400 < th dose independent rect. 4 11
393 333.62 atmosphere 995.0 14400 > th dose independent rect. 2 13
396 333.69 radiation 1.0 14400 < th dose dependent rect. 22 4
400 333.80 atmosphere 995.0 14400 < th dose independent rect. 24 16
423 334.26 atmosphere 995.0 14400 > th dose independent rect. 22 18
425 334.27 atmosphere 995.0 14400 > th dose independent rect. 20 20
450 335.03 radiation 1.0 14400 < th dose dependent rect. 23 1
457 335.24 radiation 1.0 14400 < th dose dependent rect. 19 9
474 335.81 atmosphere 995.0 14400 > th dose independent sin 5 NA
485 336.57 atmosphere 995.0 14400 < th dose dependent sin 2 NA
491 336.95 atmosphere 995.0 14400 < th dose independent sin 4 NA
534 338.03 radiation 1.0 14400 < th dose dependent rect. 1 1
538 338.27 atmosphere 995.0 14400 < th dose dependent rect. 14 11
547 338.28 atmosphere 995.0 14400 < th dose dependent rect. 3 19
651 339.67 atmosphere 995.0 14400 < th dose independent sin 23 NA
684 340.24 atmosphere 995.0 14400 > th dose independent rect. 14 23
686 340.26 atmosphere 995.0 14400 > th dose independent no NA NA
690 340.27 atmosphere 995.0 14400 > th dose independent rect. 1 23
691 340.27 atmosphere 995.0 14400 > th dose independent rect. 8 23
692 340.27 atmosphere 995.0 14400 > th dose independent rect. 12 23
694 340.28 atmosphere 995.0 14400 > th dose independent rect. 10 23
830 340.71 humidity 90.0 1440 < th dose dependent rect. 3 1
865 341.06 atmosphere 995.0 14400 < th dose independent no NA NA
867 341.06 atmosphere 995.0 14400 < th dose independent rect. 14 16
921 341.11 atmosphere 995.0 14400 < th dose independent rect. 1 23