Os02g0126900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phosphatidate cytidylyltransferase family protein.
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Os02g0126900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Phosphatidate cytidylyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.35 | 0.386 | 9.84 | 0.0293 | 0.294 | -0.756 | -0.0194 | 1.2 | -0.0968 | 18 | 21.7 | 2611 | -- | -- |
| 70.01 | 0.39 | 9.89 | -0.284 | 0.304 | -0.879 | -0.0593 | -- | -0.183 | 18.4 | 21.4 | 2451 | -- | -- |
| 67.28 | 0.382 | 9.84 | 0.0155 | 0.302 | -0.76 | -- | 1.17 | -0.1 | 18.1 | 21.67 | 2490 | -- | -- |
| 69.96 | 0.39 | 9.88 | -0.319 | 0.326 | -0.856 | -- | -- | -0.186 | 18.1 | 21.4 | 2321 | -- | -- |
| 71.82 | 0.395 | 9.83 | 0.0134 | -- | -0.772 | -- | 1.17 | -0.106 | -- | 21.57 | 2610 | -- | -- |
| 90.28 | 0.445 | 9.94 | -0.731 | 0.319 | -- | 0.0358 | -- | -0.448 | 17.3 | -- | -- | -- | -- |
| 90.28 | 0.445 | 9.94 | -0.731 | 0.319 | -- | -- | -- | -0.447 | 17.3 | -- | -- | -- | -- |
| 74.51 | 0.402 | 9.88 | -0.285 | -- | -0.887 | -- | -- | -0.185 | -- | 21.31 | 2609 | -- | -- |
| 71.76 | 0.395 | 9.87 | -- | 0.297 | -0.987 | -- | -- | -0.123 | 18.1 | 21.36 | 2585 | -- | -- |
| 95.6 | 0.457 | 9.94 | -0.742 | -- | -- | -- | -- | -0.455 | -- | -- | -- | -- | -- |
| 104.36 | 0.478 | 9.92 | -- | 0.332 | -- | -- | -- | -0.366 | 17.2 | -- | -- | -- | -- |
| 76.2 | 0.407 | 9.86 | -- | -- | -1.01 | -- | -- | -0.122 | -- | 21.3 | 2691 | -- | -- |
| 110.11 | 0.49 | 9.92 | -- | -- | -- | -- | -- | -0.373 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.47 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 2 | 65.50 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 17 |
| 5 | 65.72 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 15 | 66.07 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 32 | 66.29 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 37 | 66.44 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 52 | 66.63 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 10 |
| 89 | 66.80 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 177 | 67.17 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 12 |
| 183 | 67.19 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 193 | 67.21 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 374 | 67.61 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 394 | 67.65 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 406 | 67.67 | temperature | 15 | 1440 | > th | dose dependent | sin | 11 | NA |
| 505 | 67.90 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 513 | 67.92 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 532 | 68.00 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 540 | 68.03 | wind | 3 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 626 | 68.27 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 4 |
| 670 | 68.37 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 676 | 68.38 | wind | 3 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 733 | 68.50 | radiation | 30 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 783 | 68.61 | temperature | 15 | 270 | > th | dose dependent | rect. | 24 | 22 |
| 790 | 68.63 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 4 |
| 847 | 68.75 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 5 |
| 851 | 68.76 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 886 | 68.82 | wind | 3 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 942 | 68.90 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 19 |
| 949 | 68.92 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 975 | 68.96 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 4 |
| 983 | 68.97 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 1 |