Os02g0123400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0123400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.06 | 0.221 | 9.4 | 0.872 | 0.371 | 1.02 | -0.364 | -0.729 | 0.151 | 4.46 | 28.51 | 126 | -- | -- |
| 22.65 | 0.222 | 9.41 | 0.781 | 0.364 | 1.07 | -0.552 | -- | 0.135 | 4.44 | 27.92 | 140 | -- | -- |
| 22.34 | 0.22 | 9.39 | 0.911 | 0.375 | 1 | -- | -0.961 | 0.16 | 4.33 | 28.46 | 131 | -- | -- |
| 23.5 | 0.226 | 9.41 | 0.749 | 0.387 | 1.02 | -- | -- | 0.126 | 4.31 | 27.57 | 133 | -- | -- |
| 27.55 | 0.244 | 9.4 | 0.991 | -- | 1.33 | -- | -1.07 | 0.198 | -- | 29.54 | 132 | -- | -- |
| 37.44 | 0.287 | 9.46 | 0.483 | 0.673 | -- | -0.461 | -- | -0.0978 | 3.85 | -- | -- | -- | -- |
| 38.07 | 0.289 | 9.46 | 0.489 | 0.67 | -- | -- | -- | -0.0952 | 3.82 | -- | -- | -- | -- |
| 28.6 | 0.249 | 9.4 | 0.833 | -- | 1.33 | -- | -- | 0.181 | -- | 29.29 | 136 | -- | -- |
| 36.7 | 0.282 | 9.45 | -- | 0.484 | 0.702 | -- | -- | -0.0162 | 4.1 | 27.13 | 122 | -- | -- |
| 62.75 | 0.37 | 9.46 | 0.517 | -- | -- | -- | -- | -0.0773 | -- | -- | -- | -- | -- |
| 44.38 | 0.312 | 9.47 | -- | 0.679 | -- | -- | -- | -0.15 | 3.81 | -- | -- | -- | -- |
| 45.53 | 0.314 | 9.43 | -- | -- | 1.08 | -- | -- | 0.0432 | -- | 29.6 | 131 | -- | -- |
| 69.8 | 0.39 | 9.48 | -- | -- | -- | -- | -- | -0.135 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.76 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 22 |
| 3 | 21.25 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 10 | 22 |
| 12 | 21.91 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 21 |
| 23 | 22.17 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 26 | 22.24 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 29 | 22.34 | temperature | 30.0 | 90 | < th | dose dependent | no | NA | NA |
| 33 | 22.44 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 34 | 22.44 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 37 | 22.45 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 39 | 22.46 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 51 | 22.61 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 52 | 22.62 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 61 | 22.69 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 8 | 23 |
| 67 | 22.75 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 68 | 22.76 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 13 | 20 |
| 77 | 22.79 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 88 | 22.92 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 103 | 23.14 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 111 | 23.22 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 3 | 6 |
| 119 | 23.27 | temperature | 10.0 | 90 | > th | dose dependent | no | NA | NA |
| 159 | 23.50 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 160 | 23.50 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 183 | 23.61 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 184 | 23.61 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 4 | 9 |
| 195 | 23.63 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 196 | 23.63 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 6 | 6 |
| 203 | 23.64 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 207 | 23.65 | wind | 9.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 211 | 23.66 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 227 | 23.69 | wind | 5.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 244 | 23.73 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 255 | 23.76 | humidity | 60.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 293 | 23.84 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 20 | 2 |
| 296 | 23.84 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 17 | 8 |
| 302 | 23.85 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 2 | 9 |
| 314 | 23.87 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 23 | 13 |
| 356 | 23.92 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 357 | 23.92 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 367 | 23.93 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 2 | 9 |
| 391 | 23.94 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 9 | 14 |
| 422 | 23.97 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 430 | 23.98 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 438 | 23.99 | temperature | 25.0 | 4320 | < th | dose dependent | sin | 15 | NA |
| 448 | 23.99 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 16 |
| 464 | 24.01 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 471 | 24.02 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 472 | 24.02 | wind | 5.0 | 43200 | > th | dose independent | rect. | 15 | 7 |
| 486 | 24.03 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 506 | 24.04 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 537 | 24.07 | wind | 5.0 | 43200 | < th | dose independent | rect. | 15 | 7 |
| 546 | 24.08 | temperature | 30.0 | 1440 | < th | dose dependent | sin | 20 | NA |
| 555 | 24.09 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 569 | 24.10 | humidity | 60.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 584 | 24.11 | wind | 5.0 | 43200 | > th | dose independent | sin | 17 | NA |
| 587 | 24.11 | wind | 5.0 | 43200 | > th | dose independent | rect. | 14 | 11 |
| 627 | 24.14 | wind | 5.0 | 43200 | < th | dose independent | sin | 17 | NA |
| 628 | 24.14 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 636 | 24.14 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 9 | 14 |
| 690 | 24.17 | wind | 5.0 | 43200 | < th | dose independent | rect. | 14 | 11 |
| 709 | 24.18 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 710 | 24.18 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 714 | 24.18 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 761 | 24.20 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 783 | 24.21 | temperature | 10.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 808 | 24.22 | wind | 5.0 | 43200 | < th | dose independent | rect. | 10 | 15 |
| 813 | 24.22 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 17 | 8 |
| 834 | 24.23 | wind | 5.0 | 43200 | > th | dose independent | rect. | 9 | 13 |
| 835 | 24.23 | wind | 5.0 | 43200 | < th | dose independent | rect. | 9 | 13 |