Os02g0123100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cell division control protein 28 (EC 2.7.1.37).
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Os02g0123100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cell division control protein 28 (EC 2.7.1.37).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73.55 | 0.403 | 8.74 | -1.54 | 0.81 | 0.89 | 1.03 | 1.74 | -0.0684 | 5.51 | 1009 | 9293 | -- | -- |
| 82.69 | 0.424 | 8.75 | -1.72 | 0.788 | 0.788 | 1.1 | -- | -0.118 | 5.48 | 1009 | 9593 | -- | -- |
| 76.09 | 0.406 | 8.74 | -1.52 | 0.815 | 0.889 | -- | 1.8 | -0.0692 | 5.37 | 1009 | 9350 | -- | -- |
| 82.36 | 0.423 | 8.8 | -2.03 | 0.835 | 0.872 | -- | -- | -0.188 | 5.3 | 1009 | 9412 | -- | -- |
| 110.06 | 0.489 | 8.75 | -1.48 | -- | 0.915 | -- | 1.79 | -0.0578 | -- | 1009 | 9651 | -- | -- |
| 106.03 | 0.483 | 8.77 | -1.72 | 0.86 | -- | 1.16 | -- | -0.0526 | 5.34 | -- | -- | -- | -- |
| 109.32 | 0.49 | 8.77 | -1.72 | 0.867 | -- | -- | -- | -0.0581 | 5.21 | -- | -- | -- | -- |
| 117.44 | 0.505 | 8.8 | -2.03 | -- | 0.91 | -- | -- | -0.175 | -- | 1009 | 9702 | -- | -- |
| 180.92 | 0.626 | 8.75 | -- | 0.838 | 0.756 | -- | -- | 0.0213 | 5.21 | 1008 | 16089 | -- | -- |
| 148.64 | 0.57 | 8.78 | -1.69 | -- | -- | -- | -- | -0.0363 | -- | -- | -- | -- | -- |
| 187.57 | 0.641 | 8.73 | -- | 0.838 | -- | -- | -- | 0.134 | 5.29 | -- | -- | -- | -- |
| 215.17 | 0.683 | 8.76 | -- | -- | 0.652 | -- | -- | 0.0866 | -- | 1008 | 9908 | -- | -- |
| 224.22 | 0.699 | 8.74 | -- | -- | -- | -- | -- | 0.152 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.74 | radiation | 40 | 14400 | > th | dose independent | rect. | 15 | 18 |
| 2 | 72.98 | radiation | 30 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 17 | 73.10 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 19 | 73.17 | radiation | 40 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 35 | 73.19 | radiation | 40 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 59 | 73.64 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 61 | 73.74 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 71 | 73.78 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 75 | 73.91 | radiation | 40 | 14400 | < th | dose dependent | rect. | 15 | 10 |
| 79 | 73.92 | radiation | 40 | 14400 | < th | dose dependent | rect. | 15 | 6 |
| 83 | 73.93 | radiation | 40 | 14400 | < th | dose dependent | rect. | 15 | 4 |
| 100 | 74.00 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 116 | 74.06 | radiation | 10 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 117 | 74.06 | radiation | 10 | 14400 | > th | dose dependent | rect. | 15 | 3 |
| 155 | 74.10 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 173 | 74.12 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 225 | 74.21 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 230 | 74.21 | radiation | 10 | 14400 | < th | dose dependent | sin | 15 | NA |
| 233 | 74.22 | radiation | 30 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 234 | 74.22 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 239 | 74.22 | radiation | 40 | 14400 | > th | dose dependent | sin | 12 | NA |
| 250 | 74.27 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 268 | 74.29 | radiation | 1 | 14400 | < th | dose independent | rect. | 20 | 10 |
| 279 | 74.30 | radiation | 1 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 291 | 74.32 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 305 | 74.33 | radiation | 10 | 14400 | < th | dose dependent | rect. | 9 | 21 |
| 339 | 74.40 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 355 | 74.43 | radiation | 1 | 14400 | < th | dose independent | rect. | 16 | 14 |
| 359 | 74.44 | radiation | 30 | 14400 | < th | dose independent | rect. | 15 | 6 |
| 360 | 74.44 | radiation | 30 | 14400 | < th | dose independent | rect. | 15 | 10 |
| 367 | 74.44 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 368 | 74.45 | radiation | 30 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 372 | 74.45 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 416 | 74.54 | radiation | 10 | 14400 | < th | dose dependent | rect. | 9 | 16 |
| 423 | 74.55 | radiation | 10 | 14400 | < th | dose dependent | rect. | 9 | 10 |
| 471 | 74.60 | temperature | 25 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 487 | 74.66 | temperature | 25 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 488 | 74.66 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 554 | 74.70 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 7 |
| 570 | 74.70 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 16 | 14 |
| 578 | 74.71 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 581 | 74.71 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 643 | 74.77 | radiation | 10 | 14400 | < th | dose dependent | rect. | 16 | 21 |
| 664 | 74.80 | radiation | 40 | 14400 | > th | dose dependent | rect. | 8 | 2 |
| 723 | 74.83 | atmosphere | 1005 | 43200 | > th | dose dependent | sin | 13 | NA |
| 839 | 74.88 | radiation | 1 | 14400 | > th | dose independent | sin | 15 | NA |