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Os02g0122600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : EF-Hand type domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.4 (0.0339) R2 : 0.541
β1 : 1.72 (0.124) R2dD : 0.201 R2D : 0.1
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.29 (0.0718) R2dE : 0.325 R2E : 0.258
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.735 (0.0726) R2dN8 : 0.139 R2N8 : 0.029
σ : 0.635
deviance : 185.79
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_____
C
peak time of C : --
E
wheather : radiation
threshold : 17.08
memory length : 20
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 5.86
open length of G : 18.1

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
164.1 0.602 12.4 1.8 0.73 0.951 1.79 -1.6 0.772 18.3 15.39 67 5.32 18.7
174.24 0.615 12.4 1.72 0.707 0.975 0.877 -- 0.748 18 15.69 66 5.35 18.6
169.99 0.607 12.4 1.78 0.731 0.953 -- -1 0.768 18.6 15.96 67 5.31 18.7
174.59 0.615 12.4 1.73 0.69 0.928 -- -- 0.754 19.1 18.05 67 5.43 18.5
183.65 0.631 12.4 1.74 -- 1.25 -- -0.804 0.803 -- 16.53 21 5.9 18.2
206.98 0.674 12.5 1.64 1.41 -- -0.323 -- 0.665 20.2 -- -- -- --
207.28 0.674 12.5 1.65 1.41 -- -- -- 0.666 20.1 -- -- -- --
185.79 0.635 12.4 1.72 -- 1.29 -- -- 0.735 -- 17.08 20 5.86 18.1
251.89 0.739 12.5 -- 0.758 0.817 -- -- 0.522 19.4 17.88 67 5.48 18.4
316.65 0.831 12.4 1.64 -- -- -- -- 0.649 -- -- -- -- --
279.14 0.782 12.5 -- 1.4 -- -- -- 0.482 20.2 -- -- -- --
263.63 0.756 12.5 -- -- 1.3 -- -- 0.536 -- 15.33 20 5.88 18.1
387.54 0.919 12.5 -- -- -- -- -- 0.467 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 165.38 radiation 1.0 270 > th dose independent rect. 7 10
3 167.14 radiation 1.0 270 > th dose independent rect. 7 22
14 167.77 radiation 10.0 90 < th dose dependent rect. 5 19
15 167.80 radiation 20.0 90 < th dose dependent rect. 5 22
16 167.99 wind 1.0 270 > th dose independent rect. 4 3
18 168.63 radiation 10.0 90 < th dose independent rect. 5 19
20 169.17 radiation 10.0 90 < th dose independent rect. 5 22
23 170.11 wind 9.0 90 < th dose dependent rect. 20 9
25 170.22 radiation 20.0 10 < th dose dependent rect. 6 18
27 170.33 radiation 10.0 10 < th dose independent rect. 6 2
28 170.44 radiation 30.0 90 < th dose dependent rect. 5 4
30 170.64 radiation 10.0 10 < th dose independent rect. 6 4
31 170.70 radiation 20.0 90 < th dose independent rect. 5 4
32 170.82 radiation 10.0 10 < th dose independent rect. 6 18
36 171.05 temperature 10.0 90 > th dose dependent rect. 7 22
41 171.19 atmosphere 1000.0 90 > th dose independent rect. 5 2
48 171.39 humidity 80.0 90 > th dose independent rect. 5 12
52 171.64 humidity 80.0 90 > th dose independent rect. 5 14
54 171.97 humidity 80.0 10 > th dose independent rect. 6 14
55 171.97 temperature 10.0 90 > th dose dependent rect. 9 20
57 172.25 atmosphere 995.0 90 > th dose dependent rect. 5 2
58 172.36 humidity 80.0 10 > th dose independent rect. 6 10
59 172.37 humidity 80.0 10 > th dose independent rect. 6 12
61 172.44 radiation 20.0 10 < th dose dependent rect. 6 3
63 172.48 radiation 20.0 90 < th dose dependent rect. 6 1
64 172.50 radiation 10.0 90 < th dose independent rect. 6 1
67 172.60 precipitation 0.1 90 < th dose independent rect. 7 22
68 172.60 precipitation 0.1 90 < th dose dependent rect. 7 22
72 172.73 humidity 70.0 10 > th dose dependent rect. 6 1
76 172.84 atmosphere 1000.0 10 > th dose independent rect. 6 1
79 172.94 radiation 10.0 270 < th dose dependent rect. 2 22
85 173.02 radiation 20.0 10 < th dose dependent rect. 6 1
86 173.10 precipitation 0.1 10 < th dose independent rect. 7 23
87 173.10 temperature 30.0 10 < th dose dependent rect. 6 1
88 173.10 precipitation 0.1 10 < th dose dependent rect. 7 23
90 173.13 radiation 20.0 14400 < th dose independent rect. 21 9
92 173.17 temperature 10.0 90 > th dose dependent rect. 5 2
96 173.21 atmosphere 1015.0 90 < th dose independent rect. 7 22
104 173.42 humidity 80.0 90 > th dose independent rect. 5 2
105 173.42 radiation 10.0 270 < th dose independent rect. 15 16
106 173.42 humidity 70.0 10 > th dose dependent rect. 6 10
107 173.46 humidity 70.0 10 > th dose dependent rect. 6 14
113 173.57 radiation 1.0 90 > th dose independent rect. 9 10
123 173.57 wind 9.0 10 < th dose dependent rect. 20 10
124 173.58 wind 5.0 90 < th dose independent rect. 20 9
125 173.58 humidity 70.0 90 > th dose dependent rect. 5 12
126 173.59 wind 5.0 10 < th dose independent rect. 6 1
129 173.59 temperature 10.0 10 > th dose independent rect. 6 1
131 173.59 temperature 30.0 10 < th dose independent rect. 6 1
132 173.59 humidity 50.0 10 > th dose independent rect. 6 1
136 173.59 atmosphere 1015.0 10 < th dose independent rect. 6 1
140 173.59 precipitation 0.1 10 < th dose independent rect. 6 1
141 173.59 temperature 10.0 10 > th dose independent rect. 7 23
142 173.59 precipitation 0.1 10 < th dose dependent rect. 6 1
143 173.62 humidity 70.0 10 > th dose dependent rect. 6 12
145 173.64 humidity 50.0 90 > th dose dependent rect. 20 9
152 173.77 radiation 10.0 10 < th dose independent rect. 6 21
153 173.79 temperature 10.0 1440 > th dose independent rect. 21 9
156 173.79 temperature 30.0 1440 < th dose independent rect. 21 9
160 173.79 humidity 50.0 1440 > th dose independent rect. 21 9
166 173.79 atmosphere 995.0 1440 > th dose independent rect. 21 9
167 173.79 radiation 20.0 1440 < th dose independent rect. 21 9
176 173.79 temperature 10.0 1440 > th dose independent rect. 6 15
184 173.86 wind 9.0 10 < th dose dependent rect. 6 1
185 173.89 temperature 10.0 10 > th dose dependent rect. 7 23
187 173.90 atmosphere 1000.0 90 > th dose independent rect. 5 4
189 173.91 atmosphere 1015.0 10 < th dose dependent rect. 6 1
191 173.94 precipitation 0.1 90 < th dose independent rect. 20 9
192 173.94 precipitation 0.1 90 < th dose dependent rect. 20 9
194 173.96 wind 7.0 90 < th dose independent rect. 5 2
196 173.96 temperature 10.0 90 > th dose independent rect. 5 2
198 173.96 temperature 30.0 90 < th dose independent rect. 5 2
199 173.96 humidity 50.0 90 > th dose independent rect. 5 2
202 173.96 atmosphere 1015.0 90 < th dose independent rect. 5 2
205 173.96 temperature 10.0 90 > th dose independent rect. 7 22
209 174.03 precipitation 0.1 90 < th dose independent rect. 5 2
210 174.03 precipitation 0.1 90 < th dose dependent rect. 5 2
211 174.03 humidity 50.0 90 > th dose dependent rect. 5 4
212 174.05 radiation 30.0 270 < th dose dependent rect. 15 16
213 174.06 atmosphere 995.0 10 > th dose dependent rect. 6 1
224 174.20 precipitation 0.1 270 < th dose independent rect. 7 10
226 174.20 precipitation 0.1 270 < th dose dependent rect. 7 10
228 174.22 atmosphere 995.0 90 > th dose dependent rect. 5 4
230 174.23 wind 1.0 10 > th dose independent rect. 6 1
231 174.23 temperature 10.0 10 > th dose dependent rect. 6 1
235 174.31 humidity 80.0 90 > th dose independent rect. 5 4
240 174.36 wind 9.0 10 < th dose independent rect. 7 23
251 174.42 radiation 20.0 270 < th dose dependent rect. 13 18
258 174.48 temperature 15.0 270 > th dose independent rect. 7 10
259 174.49 radiation 1.0 10 > th dose independent rect. 6 1
268 174.59 humidity 80.0 10 > th dose independent rect. 6 8
269 174.59 radiation 10.0 10 < th dose independent rect. 6 10
278 174.69 atmosphere 995.0 270 > th dose independent rect. 17 14
297 174.77 wind 1.0 90 > th dose independent rect. 5 15
304 174.82 radiation 20.0 270 < th dose independent rect. 17 14
306 174.84 wind 9.0 4320 < th dose independent rect. 6 2
313 174.94 humidity 80.0 90 > th dose independent rect. 5 6
339 175.03 wind 9.0 90 < th dose independent rect. 7 22
349 175.16 humidity 90.0 10 < th dose independent rect. 6 1
358 175.26 atmosphere 1015.0 270 < th dose independent rect. 7 10
359 175.26 temperature 10.0 270 > th dose independent rect. 17 14
375 175.42 humidity 50.0 270 > th dose independent rect. 17 14
377 175.44 wind 9.0 270 < th dose independent rect. 7 10
378 175.44 wind 1.0 10 > th dose dependent rect. 6 1
380 175.45 temperature 25.0 90 > th dose independent rect. 9 20
384 175.47 humidity 70.0 10 > th dose dependent rect. 6 8
387 175.48 precipitation 0.1 90 < th dose independent rect. 9 20
389 175.48 wind 1.0 90 > th dose dependent rect. 5 2
390 175.48 precipitation 0.1 90 < th dose dependent rect. 9 20
391 175.51 radiation 1.0 90 < th dose independent rect. 20 9
396 175.52 radiation 10.0 90 < th dose dependent rect. 20 9
404 175.56 temperature 10.0 90 > th dose independent rect. 20 9
405 175.56 temperature 30.0 90 < th dose independent rect. 20 9
406 175.56 humidity 50.0 90 > th dose independent rect. 20 9
409 175.56 atmosphere 995.0 90 > th dose independent rect. 20 9
413 175.56 temperature 10.0 90 > th dose independent rect. 5 15
414 175.56 atmosphere 1015.0 90 < th dose independent rect. 5 15
419 175.62 atmosphere 1010.0 90 < th dose independent rect. 20 9
422 175.63 wind 9.0 90 < th dose dependent rect. 16 13
433 175.75 humidity 70.0 90 > th dose dependent rect. 5 6
436 175.78 radiation 40.0 270 < th dose dependent rect. 17 14
441 175.83 temperature 10.0 1440 > th dose independent rect. 7 1
445 175.83 temperature 30.0 1440 < th dose independent rect. 7 1
449 175.83 humidity 50.0 1440 > th dose independent rect. 7 1
454 175.83 atmosphere 995.0 1440 > th dose independent rect. 7 1
455 175.83 atmosphere 1015.0 1440 < th dose independent rect. 7 1
456 175.83 temperature 10.0 1440 > th dose independent rect. 8 23
461 175.86 wind 1.0 270 > th dose independent rect. 17 14
485 175.91 atmosphere 995.0 90 > th dose independent rect. 7 22
500 175.99 wind 9.0 90 < th dose independent rect. 5 15
515 176.06 wind 9.0 270 < th dose independent rect. 17 14
535 176.12 radiation 1.0 10 > th dose dependent rect. 6 1
537 176.13 humidity 90.0 10 < th dose dependent rect. 6 1
547 176.21 temperature 10.0 1440 > th dose independent rect. 6 4
550 176.21 atmosphere 995.0 1440 > th dose independent rect. 6 4
551 176.21 atmosphere 1015.0 1440 < th dose independent rect. 6 4
553 176.21 temperature 10.0 1440 > th dose independent rect. 10 20
559 176.27 atmosphere 1015.0 90 < th dose independent rect. 9 20
565 176.34 atmosphere 1015.0 10 < th dose independent rect. 7 23
581 176.56 radiation 1.0 270 < th dose independent rect. 2 22
586 176.59 wind 5.0 90 < th dose independent rect. 5 4
587 176.59 humidity 80.0 10 > th dose independent rect. 6 4
614 176.75 radiation 1.0 90 < th dose dependent sin 9 NA
615 176.76 radiation 1.0 270 > th dose independent sin 0 NA
625 176.86 wind 7.0 90 < th dose dependent rect. 23 6
632 176.91 temperature 30.0 90 < th dose independent rect. 5 4
638 176.95 temperature 10.0 90 > th dose independent rect. 5 4
640 176.95 humidity 50.0 90 > th dose independent rect. 5 4
642 176.95 atmosphere 1015.0 90 < th dose independent rect. 5 4
643 176.95 temperature 10.0 90 > th dose independent rect. 9 20
647 176.99 atmosphere 995.0 90 > th dose independent rect. 5 15
653 177.08 precipitation 0.1 90 < th dose independent rect. 5 4
654 177.08 precipitation 0.1 90 < th dose dependent rect. 5 4
662 177.18 humidity 80.0 10 > th dose independent rect. 6 6
663 177.18 radiation 1.0 10 > th dose independent rect. 9 9
664 177.18 atmosphere 995.0 10 > th dose independent rect. 7 23
677 177.23 precipitation 0.1 270 < th dose independent rect. 17 14
679 177.23 precipitation 0.1 270 < th dose dependent rect. 17 14
683 177.26 wind 9.0 90 < th dose independent rect. 9 20
684 177.27 precipitation 0.1 10 < th dose independent rect. 20 10
686 177.27 precipitation 0.1 10 < th dose dependent rect. 20 10
722 177.33 radiation 10.0 10 < th dose independent rect. 20 10
734 177.41 radiation 20.0 90 < th dose dependent rect. 5 10
778 177.60 humidity 70.0 720 > th dose independent rect. 19 5
786 177.66 wind 9.0 90 < th dose dependent rect. 5 4
787 177.67 wind 5.0 10 < th dose independent rect. 20 10
809 177.87 humidity 70.0 10 > th dose dependent rect. 6 4
820 177.93 radiation 20.0 10 < th dose dependent rect. 6 10
847 178.11 atmosphere 995.0 270 > th dose independent rect. 7 10
848 178.11 precipitation 0.1 90 < th dose independent rect. 5 15
849 178.11 precipitation 0.1 90 < th dose dependent rect. 5 15
870 178.16 radiation 20.0 90 < th dose dependent rect. 5 8
872 178.17 humidity 80.0 90 < th dose independent rect. 9 8
875 178.20 radiation 10.0 90 < th dose dependent rect. 5 12
878 178.22 humidity 50.0 10 > th dose dependent rect. 20 10
889 178.29 radiation 20.0 14400 < th dose independent rect. 19 11
907 178.33 humidity 80.0 90 < th dose independent rect. 7 10
915 178.35 radiation 20.0 14400 < th dose independent rect. 1 5
936 178.49 radiation 40.0 10 < th dose dependent rect. 20 10
950 178.54 temperature 10.0 90 > th dose dependent rect. 20 9
960 178.59 radiation 1.0 90 > th dose independent rect. 4 3
971 178.59 atmosphere 995.0 90 > th dose dependent rect. 5 15
981 178.68 temperature 10.0 10 > th dose independent rect. 20 10
982 178.68 temperature 30.0 10 < th dose independent rect. 20 10
983 178.68 humidity 50.0 10 > th dose independent rect. 20 10
986 178.68 atmosphere 995.0 10 > th dose independent rect. 20 10
990 178.68 temperature 10.0 10 > th dose independent rect. 6 14
992 178.68 atmosphere 1015.0 10 < th dose independent rect. 6 14