Os02g0121600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0121600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.82 | 0.369 | 11 | 0.109 | 1.26 | 0.632 | 1.75 | 0.289 | 0.45 | 22.1 | 79.24 | 895 | -- | -- |
| 61.92 | 0.366 | 11 | 0.126 | 1.26 | 0.64 | 1.66 | -- | 0.451 | 22.1 | 80 | 905 | -- | -- |
| 70.85 | 0.392 | 11 | 0.151 | 1.3 | 0.696 | -- | -1.08 | 0.444 | 22 | 80.96 | 879 | -- | -- |
| 72.57 | 0.397 | 11 | 0.0662 | 1.27 | 0.637 | -- | -- | 0.452 | 22 | 80 | 878 | -- | -- |
| 112.74 | 0.497 | 11 | 0.0372 | -- | 0.391 | -- | 0.914 | 0.414 | -- | 80.96 | 879 | -- | -- |
| 69 | 0.389 | 11 | 0.0995 | 0.97 | -- | 1.63 | -- | 0.423 | 22.2 | -- | -- | -- | -- |
| 79.64 | 0.418 | 11 | 0.0359 | 0.965 | -- | -- | -- | 0.42 | 22.1 | -- | -- | -- | -- |
| 118.14 | 0.508 | 11 | 0.0623 | -- | 0.396 | -- | -- | 0.428 | -- | 80 | 878 | -- | -- |
| 72.68 | 0.397 | 11 | -- | 1.26 | 0.628 | -- | -- | 0.443 | 22 | 79.48 | 878 | -- | -- |
| 135.89 | 0.545 | 11 | 0.0488 | -- | -- | -- | -- | 0.422 | -- | -- | -- | -- | -- |
| 79.67 | 0.418 | 11 | -- | 0.965 | -- | -- | -- | 0.416 | 22.1 | -- | -- | -- | -- |
| 118.24 | 0.508 | 11 | -- | -- | 0.395 | -- | -- | 0.421 | -- | 80 | 878 | -- | -- |
| 135.95 | 0.544 | 11 | -- | -- | -- | -- | -- | 0.416 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.20 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 2 | 59.50 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 3 | 59.61 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 4 | 59.62 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 5 | 59.79 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 6 | 59.79 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 7 | 59.86 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 8 | 60.43 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 2 | 12 |
| 9 | 60.45 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 4 | 10 |
| 14 | 60.55 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 2 | 12 |
| 17 | 60.62 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 21 | 60.69 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 31 | 60.79 | radiation | 1.0 | 10 | > th | dose independent | sin | 4 | NA |
| 65 | 61.07 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 66 | 61.08 | humidity | 80.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 75 | 61.12 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 76 | 61.13 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 4 |
| 77 | 61.13 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 4 |
| 78 | 61.14 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 12 |
| 84 | 61.18 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 85 | 61.18 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 87 | 61.19 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 91 | 61.19 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 92 | 61.20 | humidity | 80.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 94 | 61.20 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 126 | 61.32 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 151 | 61.42 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 23 | 17 |
| 169 | 61.50 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 179 | 61.55 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 7 |
| 185 | 61.58 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 191 | 61.60 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 19 |
| 192 | 61.60 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 1 | 13 |
| 197 | 61.62 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 4 |
| 213 | 61.67 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 221 | 61.70 | wind | 9.0 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 234 | 61.74 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 262 | 61.82 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 7 |
| 287 | 61.84 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 294 | 61.85 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 4 | NA |
| 303 | 61.86 | radiation | 40.0 | 10 | < th | dose independent | rect. | 11 | 18 |
| 340 | 61.93 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 364 | 61.96 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 6 | NA |
| 376 | 61.99 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 377 | 61.99 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 9 |
| 416 | 62.02 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 11 | 18 |
| 422 | 62.05 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 6 |
| 432 | 62.06 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 23 | 16 |
| 442 | 62.10 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 443 | 62.10 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 451 | 62.12 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 459 | 62.13 | humidity | 80.0 | 720 | > th | dose independent | rect. | 24 | 22 |
| 478 | 62.15 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 484 | 62.15 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 502 | 62.19 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 525 | 62.22 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 566 | 62.26 | radiation | 10.0 | 10 | < th | dose dependent | sin | 7 | NA |
| 619 | 62.32 | humidity | 80.0 | 720 | > th | dose independent | rect. | 6 | 22 |
| 636 | 62.34 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 9 | 5 |
| 641 | 62.35 | wind | 1.0 | 43200 | < th | dose independent | rect. | 21 | 9 |
| 653 | 62.35 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 9 | 19 |
| 681 | 62.39 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 696 | 62.39 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 723 | 62.41 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 725 | 62.41 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 734 | 62.43 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 742 | 62.44 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 18 |
| 749 | 62.44 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 6 | 22 |
| 754 | 62.45 | humidity | 80.0 | 720 | > th | dose independent | rect. | 6 | 16 |
| 766 | 62.46 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 772 | 62.46 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 832 | 62.51 | humidity | 80.0 | 720 | < th | dose independent | rect. | 11 | 23 |
| 890 | 62.55 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 897 | 62.56 | humidity | 80.0 | 720 | > th | dose independent | rect. | 9 | 19 |
| 916 | 62.58 | humidity | 80.0 | 720 | < th | dose independent | rect. | 11 | 21 |
| 969 | 62.62 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 11 | 4 |
| 979 | 62.63 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 11 |
| 990 | 62.64 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 1 |