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Os02g0121100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.3 (0.0163) R2 : 0.467
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.818 (0.0419) R2dC : 0.445 R2C : 0.43
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.17 (0.0344) R2dN8 : 0.037 R2N8 : 0.022
σ : 0.308
deviance : 43.44
__
_____
C
peak time of C : 16.2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
39.35 0.295 14.3 -0.0145 0.611 -0.365 0.657 0.0723 0.136 16.1 2.93 96 -- --
39.35 0.292 14.3 -0.0159 0.613 -0.36 0.632 -- 0.136 16.1 2.954 96 -- --
40.2 0.295 14.3 -0.0237 0.624 -0.344 -- -0.333 0.127 16 2.718 96 -- --
40.38 0.296 14.3 -0.0257 0.632 -0.371 -- -- 0.137 16 2.506 96 -- --
50.96 0.332 14.3 0.105 -- -0.854 -- -0.0132 0.112 -- 3.4 97 -- --
41.83 0.303 14.3 -0.108 0.813 -- 0.699 -- 0.155 16.3 -- -- -- --
43.17 0.308 14.3 -0.101 0.816 -- -- -- 0.159 16.2 -- -- -- --
50.94 0.332 14.3 0.112 -- -0.872 -- -- 0.113 -- 3.478 84 -- --
40.37 0.296 14.3 -- 0.623 -0.389 -- -- 0.136 16 2.508 96 -- --
79.21 0.416 14.3 -0.134 -- -- -- -- 0.137 -- -- -- -- --
43.44 0.308 14.3 -- 0.818 -- -- -- 0.17 16.2 -- -- -- --
51.26 0.333 14.3 -- -- -0.852 -- -- 0.103 -- 3.485 84 -- --
79.69 0.417 14.3 -- -- -- -- -- 0.152 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 36.58 temperature 10.0 10 > th dose dependent rect. 8 18
3 36.64 wind 5.0 90 < th dose dependent rect. 1 17
10 36.90 wind 5.0 90 < th dose dependent rect. 1 20
13 37.00 wind 9.0 10 < th dose dependent rect. 15 17
21 37.07 temperature 15.0 10 > th dose independent rect. 8 18
22 37.08 wind 3.0 90 < th dose independent rect. 1 17
24 37.09 wind 3.0 90 < th dose independent rect. 1 20
28 37.14 wind 5.0 90 < th dose dependent rect. 1 12
38 37.23 wind 1.0 30 > th dose independent rect. 8 18
39 37.23 temperature 20.0 270 > th dose dependent rect. 6 4
42 37.24 temperature 10.0 270 > th dose dependent rect. 5 8
59 37.33 precipitation 0.1 10 < th dose independent rect. 2 6
61 37.33 precipitation 0.1 10 < th dose dependent rect. 2 6
66 37.37 wind 3.0 90 < th dose independent rect. 1 12
73 37.39 wind 5.0 10 < th dose independent rect. 2 6
86 37.44 temperature 20.0 270 > th dose independent rect. 6 18
92 37.46 humidity 50.0 10 > th dose independent rect. 8 18
97 37.47 wind 9.0 10 < th dose dependent rect. 2 6
98 37.47 wind 7.0 90 < th dose dependent rect. 1 7
124 37.52 precipitation 0.1 10 < th dose independent rect. 8 18
126 37.52 precipitation 0.1 10 < th dose dependent rect. 8 18
127 37.53 humidity 50.0 14400 > th dose independent rect. 2 7
130 37.53 temperature 10.0 90 > th dose dependent rect. 7 7
143 37.55 temperature 20.0 270 > th dose independent rect. 5 20
154 37.58 temperature 10.0 10 > th dose independent rect. 2 6
156 37.58 temperature 30.0 10 < th dose independent rect. 2 6
157 37.58 humidity 50.0 10 > th dose independent rect. 2 6
159 37.58 atmosphere 995.0 10 > th dose independent rect. 2 6
160 37.58 atmosphere 1015.0 10 < th dose independent rect. 2 6
165 37.58 temperature 10.0 10 > th dose dependent rect. 8 7
173 37.60 radiation 40.0 10 < th dose independent rect. 2 6
179 37.62 wind 9.0 10 < th dose independent rect. 8 18
189 37.64 wind 1.0 90 > th dose independent rect. 7 8
245 37.73 wind 9.0 1440 < th dose independent rect. 3 6
246 37.73 temperature 10.0 1440 > th dose independent rect. 3 6
249 37.73 humidity 50.0 1440 > th dose independent rect. 3 6
251 37.73 atmosphere 995.0 1440 > th dose independent rect. 3 6
254 37.73 temperature 10.0 1440 > th dose independent rect. 9 18
265 37.74 temperature 10.0 10 > th dose dependent rect. 2 6
273 37.75 humidity 50.0 270 > th dose independent rect. 14 15
289 37.78 humidity 50.0 10 > th dose independent rect. 8 7
295 37.80 wind 9.0 14400 < th dose independent rect. 23 4
296 37.80 radiation 30.0 270 < th dose independent rect. 14 15
315 37.84 wind 9.0 30 < th dose dependent rect. 17 15
316 37.84 radiation 40.0 270 < th dose dependent rect. 14 15
333 37.87 humidity 90.0 90 < th dose independent rect. 7 7
341 37.88 temperature 15.0 270 > th dose independent rect. 20 14
342 37.88 wind 3.0 90 < th dose dependent sin 3 NA
371 37.93 radiation 20.0 270 < th dose dependent rect. 24 10
380 37.94 atmosphere 995.0 10 > th dose independent rect. 8 18
394 37.95 humidity 70.0 30 > th dose independent rect. 15 17
418 37.98 temperature 20.0 10 > th dose independent rect. 8 7
427 37.99 temperature 25.0 270 > th dose independent rect. 7 2
463 38.02 wind 7.0 10 < th dose independent rect. 15 17
473 38.03 temperature 25.0 270 > th dose independent rect. 6 4
567 38.10 radiation 10.0 270 < th dose independent rect. 24 9
575 38.10 temperature 10.0 270 > th dose dependent rect. 20 14
620 38.14 atmosphere 1015.0 10 < th dose independent rect. 15 17
630 38.15 temperature 10.0 10 > th dose independent rect. 8 7
633 38.15 atmosphere 995.0 10 > th dose independent rect. 8 7
634 38.15 atmosphere 1015.0 10 < th dose independent rect. 8 7
636 38.15 precipitation 0.1 10 < th dose independent rect. 8 7
640 38.15 temperature 10.0 10 > th dose independent rect. 15 17
641 38.15 precipitation 0.1 10 < th dose independent rect. 15 17
645 38.15 precipitation 0.1 10 < th dose dependent rect. 8 7
651 38.15 precipitation 0.1 10 < th dose dependent rect. 15 17
659 38.16 atmosphere 1015.0 1440 < th dose independent rect. 3 6
674 38.17 humidity 90.0 270 < th dose independent rect. 6 5
683 38.17 radiation 40.0 90 < th dose dependent rect. 1 7
707 38.19 wind 9.0 10 < th dose independent rect. 8 7
715 38.19 atmosphere 1015.0 10 < th dose dependent rect. 2 6
726 38.20 atmosphere 995.0 10 > th dose independent rect. 15 17
727 38.20 radiation 40.0 10 < th dose independent rect. 15 17
769 38.23 temperature 10.0 1440 > th dose independent rect. 9 7
772 38.23 atmosphere 1000.0 270 > th dose independent rect. 18 7
773 38.23 humidity 50.0 270 > th dose independent rect. 5 9
775 38.23 temperature 10.0 1440 > th dose independent rect. 16 17
786 38.23 radiation 10.0 270 < th dose dependent rect. 24 18
789 38.24 temperature 15.0 270 > th dose independent rect. 5 9
824 38.26 temperature 30.0 90 < th dose dependent rect. 1 11
829 38.26 temperature 30.0 270 < th dose dependent rect. 24 19
873 38.30 radiation 1.0 270 < th dose independent rect. 23 20
884 38.31 humidity 50.0 14400 > th dose independent rect. 19 8
900 38.32 atmosphere 1015.0 10 < th dose independent rect. 8 18
905 38.32 wind 1.0 90 > th dose dependent rect. 22 16
914 38.33 humidity 70.0 30 > th dose independent rect. 17 15
939 38.35 wind 3.0 30 < th dose independent sin 4 NA
947 38.35 atmosphere 1015.0 90 < th dose dependent rect. 8 1
981 38.37 radiation 1.0 10 > th dose independent rect. 8 7
998 38.38 wind 1.0 90 > th dose independent rect. 22 16