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Os02g0119600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.43 (0.0262) R2 : 0.492
β1 : 1.81 (0.0958) R2dD : 0.412 R2D : 0.336
β2 : 0.617 (0.0683) R2dC : 0.0914 R2C : 0.0655
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.389 (0.0559) R2dN8 : 0.0726 R2N8 : -0.00549
σ : 0.492
deviance : 110.36
__
_____
C
peak time of C : 18.2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
99.68 0.469 8.43 1.82 0.828 -0.462 1.49 -1.44 0.39 20.9 0.02779 38 -- --
104.87 0.477 8.44 1.77 0.84 -0.489 -0.00461 -- 0.36 21 0.01951 44 -- --
102.75 0.472 8.43 1.79 0.84 -0.464 -- -0.598 0.403 20.9 1.845e-05 41 -- --
104.82 0.477 8.44 1.75 0.847 -0.483 -- -- 0.37 20.9 8.397e-06 44 -- --
108.45 0.485 8.44 1.79 -- -0.63 -- -1.05 0.319 -- 12.33 656 -- --
107.96 0.487 8.43 1.82 0.608 -- 1.03 -- 0.386 17.8 -- -- -- --
110.36 0.492 8.43 1.81 0.617 -- -- -- 0.389 18.2 -- -- -- --
110.57 0.49 8.42 1.76 -- -0.722 -- -- 0.339 -- 12.88 671 -- --
187.46 0.638 8.44 -- 0.743 -0.424 -- -- 0.289 20.8 2.33e-05 39 -- --
130.1 0.533 8.41 1.79 -- -- -- -- 0.376 -- -- -- -- --
196.44 0.656 8.47 -- 0.592 -- -- -- 0.188 18.3 -- -- -- --
190.81 0.643 8.44 -- -- -0.913 -- -- 0.218 -- 0.009996 784 -- --
214.63 0.684 8.46 -- -- -- -- -- 0.177 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 96.43 atmosphere 1015.0 90 < th dose dependent rect. 8 6
6 96.64 atmosphere 1015.0 270 < th dose dependent rect. 8 3
7 96.72 radiation 20.0 1440 < th dose dependent rect. 19 10
8 96.88 radiation 10.0 1440 < th dose independent rect. 19 10
42 98.10 radiation 20.0 14400 < th dose independent rect. 19 11
44 98.18 humidity 60.0 14400 > th dose independent rect. 20 10
52 98.49 atmosphere 1005.0 90 < th dose independent rect. 8 6
58 98.76 wind 7.0 270 < th dose independent rect. 17 10
59 98.80 atmosphere 1005.0 270 < th dose independent rect. 9 2
64 98.87 temperature 30.0 1440 > th dose dependent rect. 8 1
94 98.91 atmosphere 1005.0 10 < th dose independent rect. 9 6
98 98.96 humidity 60.0 90 > th dose independent rect. 18 11
105 99.02 radiation 1.0 90 < th dose independent rect. 18 11
109 99.06 temperature 25.0 30 > th dose independent rect. 9 5
110 99.08 precipitation 0.1 90 < th dose independent rect. 18 11
111 99.08 precipitation 0.1 90 < th dose dependent rect. 18 11
117 99.15 radiation 1.0 90 < th dose dependent rect. 18 11
119 99.23 temperature 30.0 90 < th dose independent rect. 18 11
131 99.45 temperature 25.0 270 > th dose independent rect. 9 2
134 99.50 temperature 15.0 90 > th dose independent rect. 18 11
136 99.58 temperature 30.0 4320 > th dose independent rect. 8 1
155 99.62 atmosphere 1005.0 90 < th dose independent rect. 1 7
175 99.68 temperature 10.0 90 > th dose independent rect. 5 13
177 99.68 atmosphere 1015.0 90 < th dose independent rect. 5 13
181 99.69 atmosphere 995.0 90 > th dose independent rect. 18 11
183 99.72 temperature 25.0 30 > th dose independent rect. 9 3
189 99.77 wind 9.0 90 < th dose independent rect. 5 13
190 99.77 temperature 15.0 10 > th dose dependent rect. 9 5
193 99.81 temperature 10.0 90 > th dose dependent rect. 8 6
194 99.81 radiation 40.0 270 < th dose dependent rect. 16 11
196 99.83 humidity 50.0 270 > th dose dependent rect. 21 10
198 99.86 radiation 20.0 270 < th dose independent rect. 16 11
208 99.94 precipitation 0.1 270 < th dose independent rect. 7 14
211 99.94 precipitation 0.1 270 < th dose dependent rect. 7 14
235 100.05 temperature 30.0 4320 < th dose independent rect. 20 13
241 100.08 wind 1.0 10 > th dose independent rect. 9 5
246 100.12 humidity 60.0 1440 > th dose independent rect. 19 11
248 100.12 temperature 15.0 270 > th dose independent rect. 3 14
258 100.16 temperature 15.0 270 > th dose independent rect. 21 10
263 100.16 wind 9.0 270 < th dose independent rect. 3 14
265 100.16 atmosphere 1015.0 270 < th dose independent rect. 3 14
266 100.16 radiation 1.0 30 < th dose dependent sin 13 NA
268 100.17 atmosphere 1015.0 90 < th dose independent rect. 18 11
275 100.21 temperature 10.0 1440 > th dose independent rect. 19 11
278 100.21 temperature 30.0 1440 < th dose independent rect. 19 11
284 100.21 atmosphere 995.0 1440 > th dose independent rect. 19 11
294 100.21 temperature 10.0 1440 > th dose independent rect. 6 13
298 100.24 wind 1.0 90 > th dose independent rect. 8 6
305 100.27 temperature 15.0 10 > th dose dependent rect. 9 3
307 100.27 radiation 1.0 30 < th dose dependent rect. 18 13
308 100.28 temperature 30.0 4320 < th dose independent rect. 22 11
314 100.30 radiation 1.0 90 < th dose independent sin 13 NA
316 100.31 humidity 70.0 270 > th dose independent rect. 8 2
325 100.33 atmosphere 1015.0 270 < th dose independent rect. 7 14
331 100.34 temperature 15.0 90 > th dose independent rect. 14 18
342 100.37 temperature 30.0 4320 < th dose independent rect. 8 1
347 100.38 wind 1.0 1440 < th dose independent rect. 6 1
356 100.42 temperature 30.0 4320 < th dose independent rect. 24 9
360 100.42 temperature 15.0 10 > th dose independent rect. 14 19
361 100.42 wind 1.0 1440 < th dose dependent rect. 6 2
370 100.44 temperature 10.0 270 > th dose dependent rect. 6 6
377 100.47 temperature 30.0 4320 < th dose independent rect. 3 6
393 100.51 atmosphere 1010.0 10 < th dose independent rect. 9 3
397 100.52 radiation 1.0 10 > th dose independent rect. 9 5
401 100.54 radiation 1.0 90 > th dose independent rect. 8 6
438 100.57 temperature 15.0 270 > th dose independent rect. 12 19
439 100.57 temperature 10.0 270 > th dose dependent rect. 8 3
444 100.60 wind 1.0 90 < th dose independent rect. 24 1
456 100.63 temperature 30.0 270 < th dose independent rect. 21 10
457 100.63 humidity 50.0 270 > th dose independent rect. 21 10
459 100.63 atmosphere 995.0 270 > th dose independent rect. 21 10
460 100.63 radiation 40.0 270 < th dose independent rect. 21 10
465 100.63 temperature 10.0 270 > th dose independent rect. 7 14
476 100.68 temperature 15.0 270 > th dose independent rect. 11 21
491 100.73 precipitation 0.1 90 < th dose independent rect. 8 6
497 100.73 precipitation 0.1 90 < th dose dependent rect. 8 6
504 100.75 radiation 1.0 1440 > th dose independent rect. 10 3
506 100.75 wind 9.0 270 < th dose independent rect. 21 10
508 100.75 temperature 15.0 30 > th dose independent rect. 12 21
512 100.76 atmosphere 995.0 270 > th dose independent rect. 7 14
513 100.76 wind 1.0 270 > th dose dependent rect. 14 1
514 100.77 wind 1.0 1440 > th dose independent rect. 6 1
521 100.78 wind 1.0 4320 < th dose independent rect. 5 3
531 100.79 atmosphere 995.0 90 > th dose independent rect. 9 14
542 100.80 wind 9.0 270 < th dose independent rect. 7 14
548 100.81 temperature 10.0 90 > th dose independent rect. 8 6
549 100.81 atmosphere 995.0 90 > th dose independent rect. 8 6
551 100.81 atmosphere 1015.0 90 < th dose independent rect. 8 6
554 100.82 wind 5.0 90 > th dose independent rect. 14 16
571 100.84 wind 5.0 90 < th dose independent rect. 8 14
583 100.85 radiation 40.0 10 < th dose independent rect. 14 19
586 100.86 wind 9.0 90 < th dose independent rect. 8 6
591 100.86 wind 1.0 270 > th dose dependent rect. 12 6
592 100.87 wind 1.0 10 > th dose independent rect. 9 3
602 100.88 humidity 50.0 270 > th dose independent rect. 7 5
611 100.89 wind 1.0 90 > th dose dependent rect. 14 4
616 100.90 temperature 10.0 10 > th dose independent rect. 9 5
618 100.90 atmosphere 995.0 10 > th dose independent rect. 9 5
620 100.90 precipitation 0.1 10 < th dose independent rect. 9 5
621 100.90 precipitation 0.1 90 < th dose independent rect. 5 13
624 100.90 precipitation 0.1 10 < th dose dependent rect. 9 5
625 100.90 precipitation 0.1 90 < th dose dependent rect. 5 13
630 100.92 wind 3.0 270 > th dose independent rect. 14 1
646 100.92 wind 9.0 90 < th dose independent rect. 14 18
662 100.95 humidity 50.0 270 > th dose dependent rect. 8 2
677 100.96 atmosphere 1015.0 30 < th dose dependent rect. 14 19
681 100.97 wind 9.0 10 < th dose independent rect. 14 19
685 100.98 wind 9.0 10 < th dose independent rect. 9 5
701 101.00 temperature 10.0 1440 > th dose independent rect. 10 5
707 101.00 temperature 10.0 1440 > th dose independent rect. 15 19
724 101.02 atmosphere 1015.0 90 < th dose dependent rect. 8 15
728 101.03 wind 9.0 4320 < th dose independent rect. 18 1
729 101.03 humidity 50.0 270 > th dose independent rect. 8 3
751 101.06 wind 5.0 90 < th dose independent rect. 8 21
804 101.11 wind 1.0 4320 > th dose independent rect. 5 3
806 101.11 humidity 90.0 10 < th dose independent rect. 9 5
810 101.11 precipitation 0.1 270 < th dose independent rect. 15 23
811 101.11 wind 1.0 90 < th dose dependent rect. 24 1
814 101.11 precipitation 0.1 270 < th dose dependent rect. 15 23
815 101.12 humidity 50.0 30 > th dose independent rect. 9 3
818 101.13 radiation 1.0 10 > th dose independent rect. 9 3
836 101.15 precipitation 0.1 270 < th dose independent rect. 3 14
842 101.15 precipitation 0.1 270 < th dose dependent rect. 3 14
846 101.16 wind 3.0 270 > th dose independent rect. 12 6
855 101.16 wind 3.0 90 > th dose dependent rect. 14 16
858 101.17 precipitation 0.1 270 < th dose independent rect. 8 3
868 101.17 precipitation 0.1 270 < th dose independent rect. 21 10
875 101.17 precipitation 0.1 270 < th dose dependent rect. 8 3
878 101.17 precipitation 0.1 270 < th dose dependent rect. 21 10
889 101.19 wind 9.0 270 < th dose independent rect. 8 3
890 101.19 temperature 10.0 270 > th dose independent rect. 8 3
891 101.19 atmosphere 995.0 270 > th dose independent rect. 8 3
898 101.19 atmosphere 1015.0 270 < th dose dependent rect. 14 1
908 101.19 temperature 10.0 90 > th dose dependent rect. 14 18
914 101.20 precipitation 0.1 270 < th dose independent rect. 18 17
915 101.20 wind 9.0 270 < th dose independent rect. 12 19
919 101.20 precipitation 0.1 270 < th dose dependent rect. 18 17
921 101.21 wind 9.0 30 < th dose independent rect. 9 3
944 101.22 wind 1.0 270 > th dose independent rect. 7 14
950 101.22 temperature 10.0 10 > th dose dependent rect. 14 19
954 101.23 temperature 10.0 1440 > th dose independent rect. 10 3
957 101.23 atmosphere 995.0 1440 > th dose independent rect. 10 3
964 101.23 temperature 10.0 1440 > th dose independent rect. 13 21
978 101.24 atmosphere 1015.0 90 < th dose dependent rect. 23 9
986 101.26 temperature 10.0 30 > th dose independent rect. 9 3
988 101.26 atmosphere 995.0 30 > th dose independent rect. 9 3
990 101.26 radiation 1.0 270 > th dose independent rect. 8 3
991 101.26 precipitation 0.1 30 < th dose independent rect. 9 3
994 101.26 wind 9.0 10 < th dose independent rect. 12 21
997 101.26 precipitation 0.1 30 < th dose dependent rect. 9 3