Os02g0117900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF231, plant domain containing protein.
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Os02g0117900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF231, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40.37 | 0.299 | 7.59 | -0.436 | 0.56 | -1.51 | 0.347 | -0.397 | -0.23 | 24 | 26.32 | 80 | -- | -- |
| 40.55 | 0.297 | 7.6 | -0.503 | 0.554 | -1.48 | 0.237 | -- | -0.244 | 23.9 | 26.4 | 82 | -- | -- |
| 40.76 | 0.297 | 7.59 | -0.485 | 0.55 | -1.48 | -- | -0.134 | -0.237 | 23.8 | 26.29 | 81 | -- | -- |
| 40.78 | 0.297 | 7.59 | -0.51 | 0.548 | -1.47 | -- | -- | -0.241 | 23.8 | 26.37 | 84 | -- | -- |
| 52.24 | 0.337 | 7.57 | -0.451 | -- | -1.32 | -- | -0.162 | -0.184 | -- | 25.33 | 336 | -- | -- |
| 71.55 | 0.397 | 7.52 | -0.147 | 0.36 | -- | -0.011 | -- | 0.0791 | 21.2 | -- | -- | -- | -- |
| 71.55 | 0.396 | 7.52 | -0.147 | 0.36 | -- | -- | -- | 0.0791 | 21.2 | -- | -- | -- | -- |
| 52.27 | 0.337 | 7.57 | -0.475 | -- | -1.31 | -- | -- | -0.191 | -- | 25.4 | 336 | -- | -- |
| 46.88 | 0.319 | 7.58 | -- | 0.515 | -1.27 | -- | -- | -0.149 | 23.4 | 26.06 | 70 | -- | -- |
| 79.04 | 0.415 | 7.51 | -0.146 | -- | -- | -- | -- | 0.0772 | -- | -- | -- | -- | -- |
| 72.12 | 0.397 | 7.52 | -- | 0.36 | -- | -- | -- | 0.0955 | 21.1 | -- | -- | -- | -- |
| 57.65 | 0.354 | 7.55 | -- | -- | -1.12 | -- | -- | -0.103 | -- | 25.4 | 299 | -- | -- |
| 79.61 | 0.416 | 7.51 | -- | -- | -- | -- | -- | 0.0934 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.19 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 2 | 40.74 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 3 | 40.97 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 5 | 41.10 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 6 | 41.17 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 7 | 41.25 | temperature | 25 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 8 | 41.28 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 10 | 41.41 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 19 | 41.58 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 20 | 41.59 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 22 | 41.59 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 23 | 41.63 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 25 | 41.64 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 39 | 41.91 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 257 | 45.29 | temperature | 30 | 10 | < th | dose dependent | rect. | 16 | 16 |
| 473 | 47.21 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 15 |
| 514 | 47.44 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 540 | 47.55 | temperature | 25 | 720 | < th | dose dependent | sin | 20 | NA |
| 594 | 47.90 | temperature | 25 | 30 | < th | dose dependent | sin | 19 | NA |
| 700 | 48.63 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 718 | 48.76 | temperature | 10 | 270 | > th | dose dependent | sin | 10 | NA |
| 735 | 48.87 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 736 | 48.89 | temperature | 30 | 270 | < th | dose dependent | sin | 10 | NA |
| 784 | 49.25 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 817 | 49.47 | temperature | 25 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 896 | 49.99 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 899 | 50.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 13 |
| 902 | 50.00 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 905 | 50.01 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 11 |
| 952 | 50.15 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |