Os02g0116700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os02g0116700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 128.49 | 0.533 | 13.7 | 1.21 | 0.959 | 2.54 | 0.479 | 2.14 | -0.164 | 8 | 25.3 | 1429 | -- | -- |
| 132.27 | 0.536 | 13.6 | 1.59 | 0.949 | 2.29 | 0.469 | -- | -0.0776 | 7.83 | 26.67 | 1383 | -- | -- |
| 129.12 | 0.529 | 13.7 | 1.23 | 0.957 | 2.54 | -- | 2.13 | -0.162 | 8.14 | 25.3 | 1451 | -- | -- |
| 132.85 | 0.537 | 13.6 | 1.61 | 0.95 | 2.31 | -- | -- | -0.0612 | 8.07 | 26.65 | 1425 | -- | -- |
| 139.26 | 0.55 | 13.7 | 1.42 | -- | 2.74 | -- | 0.82 | -0.204 | -- | 61.44 | 627 | -- | -- |
| 208.41 | 0.677 | 13.7 | 0.886 | 0.935 | -- | 0.439 | -- | -0.584 | 8.37 | -- | -- | -- | -- |
| 208.99 | 0.677 | 13.7 | 0.9 | 0.933 | -- | -- | -- | -0.584 | 8.47 | -- | -- | -- | -- |
| 139.78 | 0.551 | 13.7 | 1.56 | -- | 2.76 | -- | -- | -0.165 | -- | 75.94 | 627 | -- | -- |
| 190.79 | 0.643 | 13.7 | -- | 0.943 | 1.54 | -- | -- | -0.395 | 7.93 | 26.79 | 1338 | -- | -- |
| 257.61 | 0.75 | 13.7 | 0.904 | -- | -- | -- | -- | -0.575 | -- | -- | -- | -- | -- |
| 230.33 | 0.71 | 13.7 | -- | 0.937 | -- | -- | -- | -0.684 | 8.4 | -- | -- | -- | -- |
| 198.11 | 0.656 | 13.7 | -- | -- | 2.19 | -- | -- | -0.409 | -- | 113.2 | 590 | -- | -- |
| 279.18 | 0.78 | 13.8 | -- | -- | -- | -- | -- | -0.675 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 121.75 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 2 | 121.80 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 3 |
| 3 | 121.87 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 5 |
| 14 | 122.59 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 16 | 122.69 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 81 | 123.72 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 12 |
| 82 | 123.72 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 14 |
| 201 | 124.57 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 268 | 124.96 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 331 | 125.35 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 462 | 126.06 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 464 | 126.07 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 470 | 126.12 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 475 | 126.17 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 509 | 126.35 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 664 | 127.27 | temperature | 15 | 1440 | > th | dose dependent | sin | 11 | NA |
| 885 | 128.46 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 21 |
| 907 | 128.54 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 924 | 128.61 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 950 | 128.78 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |