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Os02g0114800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to MYB1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.05) R2 : 0.648
β1 : 1.13 (0.184) R2dD : 0.0314 R2D : -0.0363
β2 : 3.08 (0.125) R2dC : 0.474 R2C : 0.429
β3 : 2.06 (0.302) R2dE : 0.039 R2E : -0.0504
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 6.95 (0.948) R2dD*E : 0.0433 R2D*E : -0.0251
γ1 : -1.12 (0.107) R2dN8 : 0.118 R2N8 : 0.079
σ : 0.919
deviance : 389.64
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C
peak time of C : 20.2
E
wheather : wind
threshold : 1.1
memory length : 1452
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 8.33
open length of G : 11.7

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
386.37 0.924 10.1 1.16 3.11 2.06 1.34 6.78 -1.13 20.1 1.1 1449 8.27 11
425.84 0.961 10.1 1.11 3.1 2.2 1.74 -- -1.15 19.8 1.099 1430 7.85 12.2
389.64 0.919 10.1 1.13 3.08 2.06 -- 6.95 -1.12 20.2 1.1 1452 8.33 11.7
428.42 0.964 10.1 1.05 3.12 2.22 -- -- -1.15 19.3 1.088 1407 7.87 12.4
482.41 1.02 10 1.21 -- 3.26 -- 5.89 -1.19 -- 1.9 527 9.62 11.4
475.58 1.02 10 0.818 3.08 -- 1.19 -- -0.974 19.9 -- -- -- --
479.69 1.03 10 0.785 3.08 -- -- -- -0.974 19.9 -- -- -- --
452.96 0.991 9.95 1.06 -- 3.83 -- -- -1.04 -- 1.501 793 7.65 11.6
456.05 0.995 10.1 -- 3.16 2.29 -- -- -1.14 18.9 1 1385 8.38 11.5
996.35 1.47 9.95 0.752 -- -- -- -- -1.01 -- -- -- -- --
495.93 1.04 10 -- 3.08 -- -- -- -1.06 19.9 -- -- -- --
477.84 1.02 9.95 -- -- 3.78 -- -- -1.05 -- 1.018 780 7.65 11.7
1011.28 1.48 9.97 -- -- -- -- -- -1.1 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 378.63 wind 3.0 43200 < th dose dependent rect. 5 2
5 383.73 precipitation 0.1 14400 > th dose dependent rect. 4 2
7 384.50 precipitation 0.1 14400 > th dose independent rect. 4 1
9 384.77 humidity 80.0 14400 < th dose dependent rect. 11 1
10 384.96 precipitation 0.1 14400 < th dose independent rect. 4 1
11 384.96 precipitation 0.1 14400 < th dose dependent rect. 4 1
16 386.62 wind 1.0 43200 > th dose dependent rect. 5 1
20 387.23 humidity 70.0 14400 < th dose dependent rect. 14 1
22 387.63 humidity 60.0 14400 < th dose independent rect. 11 6
23 387.67 humidity 70.0 14400 < th dose dependent rect. 11 6
27 387.76 humidity 70.0 14400 < th dose dependent rect. 13 3
29 387.95 humidity 60.0 14400 < th dose independent rect. 14 1
31 388.00 humidity 60.0 14400 < th dose independent rect. 13 3
36 388.42 wind 1.0 1440 > th dose independent rect. 8 11
38 388.62 humidity 80.0 14400 > th dose independent rect. 9 1
44 388.78 humidity 80.0 14400 < th dose dependent rect. 9 8
47 388.84 humidity 60.0 14400 > th dose independent rect. 14 2
49 388.89 humidity 60.0 14400 > th dose independent rect. 11 6
54 389.05 humidity 80.0 14400 < th dose independent rect. 9 1
67 389.34 wind 3.0 43200 < th dose independent rect. 5 1
92 389.80 humidity 50.0 14400 > th dose dependent rect. 9 1
97 389.86 wind 3.0 43200 > th dose independent rect. 5 1
99 389.91 humidity 50.0 14400 > th dose dependent rect. 9 3
104 390.02 humidity 50.0 14400 > th dose dependent rect. 11 1
107 390.05 humidity 50.0 14400 > th dose dependent rect. 8 9
112 390.12 humidity 70.0 14400 < th dose dependent rect. 11 21
121 390.23 humidity 70.0 14400 < th dose dependent rect. 11 11
131 390.24 humidity 50.0 14400 > th dose dependent rect. 9 6
163 390.60 humidity 80.0 14400 < th dose dependent sin 0 NA
183 390.72 humidity 60.0 14400 < th dose independent rect. 11 21
187 390.75 humidity 70.0 14400 > th dose independent rect. 11 1
197 390.84 humidity 60.0 14400 < th dose independent rect. 11 11
222 391.08 humidity 70.0 14400 < th dose independent rect. 16 21
232 391.16 wind 1.0 1440 < th dose independent rect. 8 11
314 391.64 humidity 70.0 14400 < th dose dependent sin 19 NA
348 391.78 humidity 60.0 14400 > th dose independent rect. 11 21
374 391.89 humidity 60.0 14400 > th dose independent rect. 11 14
477 392.43 humidity 70.0 14400 > th dose independent rect. 16 20
491 392.53 humidity 80.0 1440 < th dose independent rect. 3 9
554 392.70 wind 1.0 43200 < th dose independent rect. 1 12
598 392.91 humidity 70.0 14400 < th dose independent rect. 16 17
670 393.19 humidity 70.0 14400 < th dose dependent no NA NA
785 393.44 humidity 70.0 14400 > th dose independent rect. 21 16
791 393.47 humidity 60.0 14400 < th dose independent sin 19 NA
799 393.51 humidity 60.0 14400 > th dose independent rect. 22 19
800 393.51 humidity 60.0 14400 > th dose independent rect. 20 21
810 393.53 humidity 60.0 14400 > th dose independent rect. 7 10
844 393.58 humidity 50.0 14400 > th dose dependent sin 1 NA
861 393.62 humidity 70.0 14400 < th dose independent rect. 21 16
871 393.67 wind 1.0 1440 < th dose dependent rect. 9 11
872 393.68 humidity 70.0 14400 < th dose independent rect. 20 23
882 393.73 humidity 70.0 14400 < th dose independent rect. 6 7
905 393.78 humidity 70.0 14400 > th dose independent rect. 6 7
908 393.78 humidity 70.0 14400 > th dose independent rect. 2 11
960 393.99 humidity 60.0 14400 > th dose independent sin 19 NA
972 394.05 wind 1.0 43200 > th dose independent rect. 1 12
973 394.06 wind 1.0 43200 < th dose independent rect. 3 10
976 394.08 humidity 70.0 14400 < th dose independent sin 4 NA