Os02g0114400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phospholipid/glycerol acyltransferase domain containing protein.
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Os02g0114400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Phospholipid/glycerol acyltransferase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 141.33 | 0.559 | 10.9 | 0.369 | 2.02 | -4.06 | 3.04 | 0.812 | 0.0356 | 7.78 | 9.662 | 285 | 11.9 | 7.88 |
| 137.83 | 0.547 | 10.9 | 0.379 | 1.4 | -4.72 | 2.56 | -- | 0.019 | 8.65 | 4.854 | 339 | 11.3 | 8.28 |
| 149.47 | 0.569 | 10.9 | 0.178 | 1.43 | -4.36 | -- | -2.73 | -0.00656 | 7.05 | 5.34 | 304 | 12 | 8.35 |
| 158.85 | 0.587 | 10.9 | 0.454 | 1.31 | -4.81 | -- | -- | 0.0225 | 8.37 | 7.054 | 340 | 11.3 | 8.32 |
| 164.71 | 0.598 | 10.9 | 0.329 | -- | -5.32 | -- | -3.7 | 0.155 | -- | 0.4475 | 298 | 11.7 | 9.55 |
| 324.86 | 0.845 | 10.9 | 0.0196 | 5.04 | -- | 3.3 | -- | -0.218 | 6.91 | -- | -- | -- | -- |
| 352.68 | 0.879 | 10.9 | 0.0765 | 5.05 | -- | -- | -- | -0.228 | 6.86 | -- | -- | -- | -- |
| 166.69 | 0.601 | 10.9 | 0.556 | -- | -5.72 | -- | -- | 0.131 | -- | 2.619 | 348 | 11.3 | 9.21 |
| 164.04 | 0.597 | 10.9 | -- | 1.35 | -4.71 | -- | -- | -0.0236 | 8.12 | 6.743 | 334 | 11.4 | 8.33 |
| 1687.89 | 1.92 | 11 | 0.186 | -- | -- | -- | -- | -0.132 | -- | -- | -- | -- | -- |
| 352.84 | 0.879 | 10.9 | -- | 5.05 | -- | -- | -- | -0.237 | 6.86 | -- | -- | -- | -- |
| 172.08 | 0.611 | 10.9 | -- | -- | -5.72 | -- | -- | 0.0383 | -- | 1.943 | 346 | 11.4 | 9.21 |
| 1688.8 | 1.92 | 11 | -- | -- | -- | -- | -- | -0.152 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 142.68 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 8 |
| 2 | 145.03 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 18 |
| 5 | 147.74 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 20 |
| 15 | 155.66 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 39 | 163.17 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 45 | 165.25 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 16 | 10 |
| 57 | 168.72 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 14 | 6 |
| 60 | 168.86 | radiation | 1.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 62 | 169.27 | temperature | 20.0 | 270 | > th | dose independent | rect. | 12 | 7 |
| 63 | 169.28 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 7 |
| 70 | 170.03 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 7 |
| 76 | 170.53 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 16 |
| 96 | 172.90 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 12 | 7 |
| 98 | 173.06 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 14 | 3 |
| 102 | 173.34 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 106 | 173.42 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 7 |
| 109 | 173.42 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 17 |
| 110 | 173.42 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 17 |
| 113 | 173.59 | humidity | 90.0 | 270 | < th | dose independent | rect. | 12 | 7 |
| 117 | 173.96 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 121 | 174.08 | radiation | 1.0 | 270 | < th | dose independent | sin | 15 | NA |
| 123 | 174.36 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 7 |
| 124 | 174.36 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 7 |
| 130 | 175.00 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 17 |
| 131 | 175.00 | radiation | 1.0 | 270 | < th | dose dependent | sin | 16 | NA |
| 139 | 175.63 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 140 | 175.63 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 141 | 175.63 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 6 |
| 142 | 175.63 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 18 |
| 143 | 175.67 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 6 |
| 144 | 175.67 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 6 |
| 156 | 176.46 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 169 | 176.59 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 17 |
| 170 | 176.59 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 17 |
| 180 | 177.05 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 182 | 177.17 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 18 |
| 183 | 177.17 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 18 |
| 186 | 177.29 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 6 |
| 196 | 178.40 | radiation | 1.0 | 270 | > th | dose independent | sin | 16 | NA |
| 205 | 178.72 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 222 | 179.28 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 224 | 179.34 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 18 |
| 256 | 180.12 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 17 |
| 262 | 180.28 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 12 | 7 |
| 292 | 181.75 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 18 |
| 322 | 182.58 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 17 |
| 353 | 183.14 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 357 | 183.14 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 358 | 183.14 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 382 | 183.78 | radiation | 30.0 | 270 | < th | dose independent | rect. | 23 | 9 |
| 412 | 184.19 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 14 | 6 |
| 420 | 184.32 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 8 |
| 421 | 184.33 | humidity | 70.0 | 270 | > th | dose independent | rect. | 23 | 9 |
| 423 | 184.42 | wind | 1.0 | 10 | > th | dose independent | rect. | 14 | 6 |
| 432 | 184.58 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 9 |
| 433 | 184.58 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 9 |
| 434 | 184.58 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 9 |
| 436 | 184.58 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 9 |
| 437 | 184.58 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 15 |
| 438 | 184.63 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 9 |
| 449 | 184.84 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 464 | 185.23 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 14 | 6 |
| 465 | 185.23 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 14 | 6 |
| 478 | 185.52 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 23 | 9 |
| 482 | 185.74 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 9 |
| 484 | 185.78 | wind | 9.0 | 10 | < th | dose independent | rect. | 14 | 6 |
| 497 | 186.18 | temperature | 20.0 | 30 | > th | dose independent | rect. | 14 | 6 |
| 501 | 186.31 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 8 | 17 |
| 521 | 187.07 | temperature | 10.0 | 10 | > th | dose independent | rect. | 14 | 6 |
| 523 | 187.07 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 14 | 6 |
| 525 | 187.07 | temperature | 10.0 | 10 | > th | dose independent | rect. | 20 | 18 |
| 526 | 187.07 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 20 | 18 |
| 539 | 187.39 | humidity | 90.0 | 270 | < th | dose independent | rect. | 14 | 3 |
| 562 | 187.88 | radiation | 40.0 | 10 | < th | dose independent | rect. | 14 | 6 |
| 565 | 187.90 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 15 |
| 566 | 187.90 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 15 |
| 579 | 188.21 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 580 | 188.26 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 630 | 188.99 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 649 | 189.20 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 9 |
| 650 | 189.20 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 9 |
| 674 | 189.73 | temperature | 20.0 | 270 | > th | dose independent | rect. | 14 | 3 |
| 675 | 189.73 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 17 |
| 678 | 189.83 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 14 | 3 |
| 680 | 189.90 | wind | 1.0 | 270 | > th | dose independent | rect. | 18 | 8 |
| 681 | 189.90 | wind | 9.0 | 10 | < th | dose independent | rect. | 20 | 18 |
| 705 | 190.23 | radiation | 1.0 | 270 | > th | dose independent | rect. | 14 | 3 |
| 706 | 190.23 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 8 | 15 |
| 727 | 190.69 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 22 |
| 732 | 190.73 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 3 |
| 743 | 191.07 | wind | 9.0 | 270 | < th | dose independent | rect. | 8 | 15 |
| 747 | 191.20 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 20 |
| 748 | 191.22 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 9 |
| 749 | 191.22 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 774 | 191.78 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 6 |
| 777 | 191.78 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 18 |
| 819 | 192.24 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 20 | 18 |
| 820 | 192.24 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 20 | 18 |
| 823 | 192.28 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 14 | 17 |
| 839 | 192.51 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 3 |
| 840 | 192.51 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 3 |
| 851 | 192.71 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 3 |
| 853 | 192.71 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 14 | 3 |
| 855 | 192.71 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 21 |
| 877 | 193.00 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 8 |
| 888 | 193.17 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 23 | 9 |
| 904 | 193.50 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 14 | 5 |
| 928 | 193.90 | radiation | 40.0 | 90 | < th | dose independent | rect. | 14 | 19 |
| 972 | 194.72 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 2 |
| 973 | 194.72 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 9 | 2 |
| 974 | 194.72 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 9 | 2 |
| 976 | 194.72 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 22 |
| 985 | 194.91 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 2 |
| 987 | 194.91 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 2 |