Os02g0114200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Serine carboxypeptidase III precursor (EC 3.4.16.5).
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Os02g0114200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Serine carboxypeptidase III precursor (EC 3.4.16.5).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 141.51 | 0.559 | 8.78 | -2.08 | 1.11 | 0.0851 | -0.198 | 6.56 | -1.11 | 9.16 | 29.3 | 1032 | -- | -- |
| 143.47 | 0.558 | 8.89 | -3.09 | 1.16 | 0.843 | -0.0329 | -- | -1.13 | 8.94 | 30.18 | 966 | -- | -- |
| 141.53 | 0.554 | 8.78 | -2.04 | 1.12 | 0.0737 | -- | 6.85 | -1.1 | 9.13 | 29.08 | 1009 | -- | -- |
| 143.42 | 0.558 | 8.89 | -3.09 | 1.15 | 0.858 | -- | -- | -1.13 | 9.05 | 30.1 | 967 | -- | -- |
| 206.63 | 0.67 | 8.78 | -1.85 | -- | -0.121 | -- | 6.63 | -1.1 | -- | 29.36 | 1342 | -- | -- |
| 169.13 | 0.61 | 8.93 | -2.9 | 1.02 | -- | -0.471 | -- | -1.27 | 8.87 | -- | -- | -- | -- |
| 169.88 | 0.61 | 8.93 | -2.91 | 1.02 | -- | -- | -- | -1.27 | 8.85 | -- | -- | -- | -- |
| 208.99 | 0.673 | 8.93 | -3.09 | -- | 0.627 | -- | -- | -1.15 | -- | 29.5 | 1345 | -- | -- |
| 387.89 | 0.917 | 8.83 | -- | 1.12 | 0.576 | -- | -- | -0.823 | 8.96 | 32.06 | 843 | -- | -- |
| 228.9 | 0.707 | 8.96 | -2.91 | -- | -- | -- | -- | -1.26 | -- | -- | -- | -- | -- |
| 393.59 | 0.928 | 8.85 | -- | 1.01 | -- | -- | -- | -0.941 | 9.07 | -- | -- | -- | -- |
| 288.44 | 0.791 | 8.74 | -- | -- | -2.06 | -- | -- | -0.318 | -- | 8.245 | 47520 | -- | -- |
| 452.73 | 0.993 | 8.88 | -- | -- | -- | -- | -- | -0.935 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 139.75 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 15 | 16 |
| 3 | 140.06 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 16 |
| 11 | 140.69 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 15 | 9 |
| 12 | 140.71 | wind | 9.0 | 43200 | < th | dose independent | rect. | 16 | 16 |
| 21 | 141.28 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 15 | 6 |
| 22 | 141.38 | temperature | 30.0 | 720 | > th | dose independent | sin | 13 | NA |
| 29 | 141.50 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 19 |
| 32 | 141.51 | wind | 9.0 | 43200 | < th | dose independent | rect. | 15 | 18 |
| 34 | 141.53 | wind | 9.0 | 43200 | > th | dose independent | sin | 12 | NA |
| 39 | 141.62 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 8 |
| 42 | 141.64 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 18 | 4 |
| 45 | 141.68 | wind | 7.0 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 55 | 141.77 | wind | 7.0 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 60 | 141.86 | wind | 9.0 | 43200 | < th | dose independent | rect. | 16 | 8 |
| 64 | 141.88 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 6 |
| 75 | 142.02 | wind | 9.0 | 43200 | < th | dose independent | sin | 12 | NA |
| 80 | 142.04 | wind | 7.0 | 43200 | > th | dose dependent | sin | 13 | NA |
| 84 | 142.09 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 88 | 142.14 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 8 |
| 101 | 142.24 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 15 |
| 102 | 142.27 | temperature | 30.0 | 720 | > th | dose independent | rect. | 15 | 4 |
| 140 | 142.52 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 162 | 142.69 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 5 |
| 168 | 142.73 | temperature | 30.0 | 720 | < th | dose independent | sin | 13 | NA |
| 169 | 142.74 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 13 |
| 208 | 143.07 | humidity | 50.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 229 | 143.16 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 297 | 143.47 | wind | 1.0 | 1440 | < th | dose independent | rect. | 2 | 4 |
| 300 | 143.47 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 314 | 143.55 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 355 | 143.80 | wind | 1.0 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 380 | 143.87 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 387 | 143.96 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 2 |
| 394 | 144.00 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 15 |
| 395 | 144.01 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 400 | 144.03 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 12 |
| 403 | 144.05 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 407 | 144.06 | wind | 1.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 420 | 144.10 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 7 |
| 427 | 144.13 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 17 | 2 |
| 448 | 144.15 | humidity | 70.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 463 | 144.23 | temperature | 30.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 468 | 144.26 | wind | 9.0 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 509 | 144.41 | wind | 1.0 | 1440 | > th | dose independent | rect. | 2 | 4 |
| 520 | 144.44 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 547 | 144.55 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 17 | 16 |
| 556 | 144.60 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 5 |
| 557 | 144.61 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 16 | 4 |
| 567 | 144.65 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 8 |
| 588 | 144.74 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 16 | 16 |
| 685 | 144.95 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 17 |
| 729 | 145.09 | wind | 7.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 740 | 145.12 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 20 | 15 |
| 752 | 145.14 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 769 | 145.21 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 15 | 4 |
| 773 | 145.22 | temperature | 30.0 | 720 | < th | dose independent | rect. | 10 | 9 |
| 782 | 145.24 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 809 | 145.25 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 4 | 7 |
| 819 | 145.27 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 22 | 14 |
| 850 | 145.31 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 851 | 145.31 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 22 | 5 |
| 866 | 145.33 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 9 | 2 |
| 872 | 145.34 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 874 | 145.34 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 7 | 5 |
| 877 | 145.34 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 898 | 145.36 | humidity | 60.0 | 1440 | < th | dose independent | sin | 16 | NA |
| 916 | 145.37 | atmosphere | 1005.0 | 14400 | < th | dose dependent | sin | 7 | NA |
| 917 | 145.37 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 968 | 145.40 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 4 | 8 |