Os02g0113900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0113900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 198.38 | 0.662 | 3.93 | 0.0416 | 0.333 | -0.928 | 0.837 | -0.365 | -0.792 | 9.42 | 0.1266 | 5392 | -- | -- |
| 198.48 | 0.656 | 3.93 | 0.0444 | 0.32 | -0.972 | 0.81 | -- | -0.806 | 9.43 | 0.1523 | 5402 | -- | -- |
| 200.88 | 0.66 | 3.93 | 0.0742 | 0.326 | -0.947 | -- | -0.278 | -0.79 | 9.67 | 0.1574 | 5400 | -- | -- |
| 200.92 | 0.66 | 3.93 | 0.0764 | 0.324 | -0.997 | -- | -- | -0.794 | 9.65 | 0.1905 | 5400 | -- | -- |
| 207.23 | 0.67 | 3.94 | 0.0822 | -- | -0.938 | -- | -0.356 | -0.788 | -- | 0.1914 | 5399 | -- | -- |
| 217.99 | 0.692 | 3.9 | -0.228 | 0.329 | -- | 0.868 | -- | -0.681 | 9.68 | -- | -- | -- | -- |
| 220.83 | 0.696 | 3.9 | -0.195 | 0.325 | -- | -- | -- | -0.68 | 9.73 | -- | -- | -- | -- |
| 207.26 | 0.671 | 3.94 | 0.0812 | -- | -0.994 | -- | -- | -0.791 | -- | 0.2446 | 5399 | -- | -- |
| 201.06 | 0.66 | 3.93 | -- | 0.328 | -0.972 | -- | -- | -0.798 | 9.65 | 0.192 | 5400 | -- | -- |
| 227.12 | 0.704 | 3.91 | -0.198 | -- | -- | -- | -- | -0.679 | -- | -- | -- | -- | -- |
| 221.84 | 0.697 | 3.9 | -- | 0.326 | -- | -- | -- | -0.658 | 9.77 | -- | -- | -- | -- |
| 207.41 | 0.671 | 3.94 | -- | -- | -0.967 | -- | -- | -0.796 | -- | 0.2296 | 5399 | -- | -- |
| 228.15 | 0.705 | 3.91 | -- | -- | -- | -- | -- | -0.657 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 189.73 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 2 | 2 |
| 21 | 192.05 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 24 | 192.34 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 32 | 192.74 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 44 | 193.36 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 58 | 193.76 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 70 | 194.02 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 19 | 11 |
| 75 | 194.13 | wind | 3.0 | 14400 | < th | dose dependent | sin | 10 | NA |
| 95 | 194.36 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 103 | 194.46 | wind | 3.0 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 133 | 194.81 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 23 | 14 |
| 137 | 194.85 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 8 |
| 162 | 195.04 | wind | 1.0 | 14400 | > th | dose dependent | sin | 10 | NA |
| 164 | 195.05 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 5 |
| 171 | 195.08 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 19 | 15 |
| 227 | 195.35 | wind | 3.0 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 310 | 195.64 | wind | 3.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 357 | 195.74 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 11 |
| 361 | 195.75 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 14 |
| 411 | 195.88 | wind | 3.0 | 14400 | < th | dose independent | rect. | 18 | 15 |
| 455 | 196.02 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 493 | 196.15 | wind | 1.0 | 43200 | > th | dose independent | rect. | 22 | 15 |
| 511 | 196.22 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 16 |
| 523 | 196.26 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 524 | 196.26 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 13 |
| 527 | 196.28 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 7 |
| 536 | 196.34 | wind | 3.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 540 | 196.35 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 566 | 196.43 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 567 | 196.43 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 569 | 196.43 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 585 | 196.47 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 4 |
| 601 | 196.53 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 603 | 196.55 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 10 |
| 614 | 196.57 | wind | 3.0 | 14400 | > th | dose independent | rect. | 18 | 15 |
| 616 | 196.58 | wind | 1.0 | 43200 | < th | dose independent | rect. | 11 | 19 |
| 659 | 196.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 663 | 196.74 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 664 | 196.74 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 5 |
| 675 | 196.78 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 686 | 196.81 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 2 | 6 |
| 697 | 196.84 | wind | 9.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 718 | 196.89 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 5 |
| 727 | 196.90 | wind | 1.0 | 43200 | < th | dose independent | rect. | 8 | 22 |
| 772 | 197.02 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 10 |
| 808 | 197.11 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 835 | 197.17 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 11 |
| 933 | 197.37 | wind | 1.0 | 43200 | > th | dose independent | rect. | 11 | 19 |
| 934 | 197.37 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 7 | 3 |
| 970 | 197.45 | wind | 1.0 | 43200 | > th | dose independent | rect. | 16 | 21 |
| 971 | 197.45 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |