Os02g0110700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0110700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.03 | 0.301 | 10 | 1.98 | 0.472 | -0.561 | -0.153 | 3.23 | 0.79 | 2 | 21.1 | 1700 | -- | -- |
| 49.23 | 0.327 | 10.1 | 1.21 | 0.52 | -0.459 | -0.00809 | -- | 0.611 | 2.07 | 18.29 | 9788 | -- | -- |
| 41.09 | 0.299 | 10 | 2 | 0.474 | -0.569 | -- | 3.24 | 0.793 | 2.06 | 21.36 | 1650 | -- | -- |
| 48.11 | 0.323 | 10.1 | 1.21 | 0.503 | -0.574 | -- | -- | 0.613 | 2.21 | 12.13 | 9229 | -- | -- |
| 49.47 | 0.329 | 10.1 | 1.43 | -- | -0.869 | -- | 2.28 | 0.679 | -- | 21.36 | 1650 | -- | -- |
| 53.21 | 0.342 | 10.1 | 0.89 | 0.484 | -- | -0.171 | -- | 0.439 | 2.31 | -- | -- | -- | -- |
| 53.32 | 0.342 | 10.1 | 0.895 | 0.483 | -- | -- | -- | 0.44 | 2.3 | -- | -- | -- | -- |
| 53.18 | 0.341 | 10.1 | 1.09 | -- | -0.985 | -- | -- | 0.583 | -- | 12.13 | 9229 | -- | -- |
| 72.61 | 0.397 | 10.2 | -- | 0.468 | -0.308 | -- | -- | 0.317 | 1.77 | 33.6 | 540 | -- | -- |
| 67.19 | 0.383 | 10.1 | 0.915 | -- | -- | -- | -- | 0.452 | -- | -- | -- | -- | -- |
| 74.42 | 0.404 | 10.2 | -- | 0.501 | -- | -- | -- | 0.341 | 2.33 | -- | -- | -- | -- |
| 76.03 | 0.406 | 10.2 | -- | -- | 0.585 | -- | -- | 0.175 | -- | -22.84 | 47520 | -- | -- |
| 89.28 | 0.441 | 10.2 | -- | -- | -- | -- | -- | 0.35 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.83 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 11 | 39.84 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 13 | 39.95 | humidity | 90 | 14400 | > th | dose independent | rect. | 19 | 10 |
| 14 | 40.01 | humidity | 90 | 14400 | > th | dose dependent | rect. | 19 | 10 |
| 18 | 40.06 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 6 |
| 26 | 40.14 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 35 | 40.19 | wind | 5 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 36 | 40.20 | wind | 5 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 41 | 40.25 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 44 | 40.27 | temperature | 20 | 1440 | > th | dose dependent | rect. | 14 | 16 |
| 46 | 40.28 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 9 |
| 50 | 40.30 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 68 | 40.35 | wind | 3 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 82 | 40.41 | temperature | 20 | 1440 | > th | dose dependent | sin | 15 | NA |
| 97 | 40.46 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 13 |
| 107 | 40.49 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 113 | 40.50 | humidity | 90 | 14400 | > th | dose dependent | sin | 12 | NA |
| 123 | 40.52 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 128 | 40.52 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 7 |
| 150 | 40.56 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 4 |
| 153 | 40.57 | wind | 3 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 154 | 40.57 | wind | 3 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 155 | 40.57 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 2 |
| 178 | 40.61 | wind | 1 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 184 | 40.62 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 188 | 40.63 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 194 | 40.64 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 211 | 40.68 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 8 |
| 215 | 40.69 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 9 |
| 219 | 40.70 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 244 | 40.73 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 4 |
| 286 | 40.79 | wind | 7 | 43200 | < th | dose dependent | rect. | 11 | 5 |
| 317 | 40.84 | humidity | 80 | 43200 | < th | dose independent | rect. | 23 | 10 |
| 321 | 40.84 | wind | 1 | 43200 | > th | dose dependent | rect. | 11 | 6 |
| 332 | 40.86 | wind | 5 | 43200 | < th | dose dependent | rect. | 11 | 3 |
| 338 | 40.87 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 6 |
| 358 | 40.90 | wind | 3 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 369 | 40.91 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 418 | 40.98 | humidity | 90 | 14400 | > th | dose independent | sin | 11 | NA |
| 506 | 41.07 | humidity | 80 | 43200 | < th | dose dependent | rect. | 19 | 13 |
| 529 | 41.09 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 5 |
| 544 | 41.11 | wind | 3 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 559 | 41.14 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 565 | 41.15 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 9 |
| 575 | 41.16 | radiation | 20 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 615 | 41.20 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 7 |
| 639 | 41.22 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 652 | 41.24 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 8 |
| 675 | 41.26 | humidity | 80 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 679 | 41.26 | wind | 1 | 43200 | > th | dose dependent | rect. | 11 | 10 |
| 704 | 41.28 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 10 |
| 715 | 41.30 | radiation | 1 | 43200 | > th | dose independent | rect. | 5 | 6 |
| 722 | 41.31 | radiation | 1 | 43200 | < th | dose independent | rect. | 5 | 6 |
| 732 | 41.32 | wind | 9 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 777 | 41.34 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 791 | 41.35 | humidity | 80 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 795 | 41.35 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 6 |
| 825 | 41.36 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 948 | 41.42 | radiation | 1 | 43200 | > th | dose independent | sin | 7 | NA |
| 950 | 41.42 | radiation | 1 | 43200 | < th | dose independent | sin | 7 | NA |
| 969 | 41.43 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 988 | 41.44 | radiation | 1 | 43200 | < th | dose dependent | rect. | 5 | 4 |