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Os02g0110600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.87 (0.0457) R2 : 0.56
β1 : -2.9 (0.169) R2dD : 0.305 R2D : 0.0833
β2 : 1.33 (0.116) R2dC : 0.129 R2C : 0.0271
β3 : -1.75 (0.14) R2dE : 0.163 R2E : -0.0451
β4 : 2.62 (0.492) R2dD*C : 0.0276 R2D*C : -0.0367
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.41 (0.0991) R2dN8 : 0.274 R2N8 : 0.0485
σ : 0.849
deviance : 332.39
__
_____
C
peak time of C : 8.1
E
wheather : humidity
threshold : 71.94
memory length : 1219
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
332.37 0.857 9.86 -2.88 1.33 -1.74 2.63 -0.112 -1.41 8.11 72 1219 -- --
332.39 0.849 9.87 -2.9 1.33 -1.75 2.62 -- -1.41 8.1 71.94 1219 -- --
352.61 0.875 9.87 -2.86 1.3 -1.71 -- 0.283 -1.42 7.93 71.8 1232 -- --
352.76 0.875 9.87 -2.82 1.3 -1.7 -- -- -1.41 7.91 71.88 1238 -- --
434.21 0.971 9.9 -2.79 -- -1.66 -- 0.0714 -1.37 -- 72.39 1318 -- --
437.89 0.981 9.81 -2.52 1.25 -- 2.45 -- -1.16 7.03 -- -- -- --
453.12 0.997 9.82 -2.47 1.26 -- -- -- -1.17 6.78 -- -- -- --
434.22 0.971 9.9 -2.78 -- -1.66 -- -- -1.37 -- 72.22 1318 -- --
527.56 1.07 9.75 -- 1.67 -2.27 -- -- -1.03 7.67 82.64 2206 -- --
536.38 1.08 9.84 -2.45 -- -- -- -- -1.14 -- -- -- -- --
614.54 1.16 9.76 -- 1.23 -- -- -- -0.89 6.9 -- -- -- --
619.82 1.16 9.8 -- -- -2.21 -- -- -1.16 -- 82 2753 -- --
694.27 1.23 9.78 -- -- -- -- -- -0.87 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 342.37 humidity 70 720 > th dose independent sin 12 NA
2 342.77 temperature 25 720 > th dose dependent rect. 18 6
6 344.06 humidity 80 1440 < th dose dependent rect. 16 1
7 344.08 humidity 80 1440 < th dose dependent rect. 10 12
13 344.33 humidity 80 1440 < th dose dependent sin 18 NA
21 344.52 humidity 80 1440 < th dose dependent rect. 10 22
35 344.94 temperature 25 720 > th dose dependent rect. 18 14
41 345.05 humidity 90 720 < th dose dependent rect. 17 6
44 345.06 humidity 80 1440 < th dose dependent rect. 7 15
72 345.35 humidity 70 720 < th dose independent sin 12 NA
83 345.48 humidity 80 1440 < th dose dependent rect. 15 6
90 345.55 humidity 80 1440 < th dose dependent rect. 13 8
97 345.57 humidity 80 1440 < th dose dependent rect. 13 23
99 345.60 humidity 50 1440 > th dose dependent sin 22 NA
103 345.61 humidity 80 1440 < th dose dependent rect. 15 23
107 345.66 humidity 80 1440 < th dose dependent rect. 15 3
134 345.84 humidity 70 1440 < th dose independent sin 15 NA
142 345.86 humidity 50 1440 > th dose dependent rect. 6 13
143 345.86 humidity 50 1440 > th dose dependent rect. 6 15
178 346.05 humidity 50 1440 > th dose dependent rect. 9 12
179 346.07 humidity 80 1440 < th dose dependent no NA NA
207 346.24 humidity 50 1440 > th dose dependent rect. 9 14
225 346.31 humidity 80 1440 < th dose dependent rect. 13 19
232 346.34 humidity 80 1440 < th dose dependent rect. 20 23
234 346.35 humidity 50 720 > th dose dependent rect. 16 8
278 346.56 humidity 70 720 > th dose independent rect. 16 8
322 346.85 humidity 70 720 > th dose independent rect. 16 17
431 347.65 humidity 60 1440 > th dose dependent rect. 11 2
434 347.65 radiation 20 1440 > th dose dependent rect. 16 16
449 347.77 humidity 70 1440 < th dose independent rect. 10 21
452 347.79 humidity 70 1440 < th dose independent rect. 10 10
465 347.81 humidity 70 1440 > th dose independent rect. 9 11
469 347.82 humidity 70 1440 > th dose independent rect. 9 22
470 347.83 humidity 70 1440 > th dose independent rect. 9 16
471 347.83 humidity 70 1440 > th dose independent rect. 9 18
472 347.83 humidity 70 1440 > th dose independent rect. 9 20
641 348.87 humidity 70 1440 < th dose independent rect. 17 21
664 348.97 humidity 70 1440 > th dose independent rect. 18 20
676 349.02 temperature 25 720 > th dose dependent sin 13 NA
683 349.14 humidity 70 1440 < th dose independent rect. 15 16
689 349.19 humidity 70 1440 < th dose independent rect. 15 5
753 349.54 humidity 60 1440 > th dose independent rect. 13 6
755 349.55 humidity 70 1440 < th dose independent rect. 17 23
762 349.63 humidity 70 1440 < th dose independent rect. 15 22
765 349.67 humidity 70 1440 > th dose independent rect. 15 22
783 349.75 humidity 60 1440 > th dose independent rect. 13 18
785 349.76 humidity 60 1440 > th dose independent rect. 13 16
786 349.77 humidity 60 1440 > th dose independent rect. 13 14
789 349.78 humidity 60 1440 > th dose independent rect. 13 12
813 349.96 humidity 50 1440 > th dose dependent rect. 9 23
830 350.07 humidity 70 1440 > th dose independent sin 17 NA
894 350.32 humidity 50 1440 > th dose dependent no NA NA
940 350.58 humidity 70 720 < th dose independent rect. 17 15
957 350.62 humidity 70 720 < th dose independent rect. 17 3
984 350.68 temperature 30 43200 > th dose dependent rect. 18 1