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Os02g0109200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF793 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.1 (0.0144) R2 : 0.659
β1 : 0.771 (0.0526) R2dD : 0.167 R2D : 0.0777
β2 : 0.868 (0.0373) R2dC : 0.408 R2C : 0.395
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.375 (0.0307) R2dN8 : 0.15 R2N8 : 0.0739
σ : 0.27
deviance : 33.24
__
_____
C
peak time of C : 5.03
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
29.6 0.256 11.1 0.762 0.773 0.134 -0.533 0.672 0.371 5.54 80.23 14 -- --
32.3 0.265 11.1 0.782 0.767 0.137 -0.21 -- 0.377 5.52 80 23 -- --
30.25 0.256 11.1 0.761 0.778 0.127 -- 0.597 0.373 5.46 80 13 -- --
32.39 0.265 11.1 0.78 0.773 0.128 -- -- 0.379 5.43 80.37 27 -- --
47.11 0.32 11.1 0.629 -- 0.607 -- 0.618 0.379 -- 75 335 -- --
33.22 0.27 11.1 0.77 0.869 -- -0.0917 -- 0.375 5.05 -- -- -- --
33.24 0.27 11.1 0.771 0.868 -- -- -- 0.375 5.03 -- -- -- --
46.14 0.316 11.1 0.838 -- 0.651 -- -- 0.425 -- 75.75 372 -- --
48.1 0.323 11.1 -- 0.769 0.135 -- -- 0.292 5.33 81 124 -- --
72.85 0.399 11.1 0.802 -- -- -- -- 0.397 -- -- -- -- --
48.89 0.327 11.1 -- 0.882 -- -- -- 0.289 5 -- -- -- --
60.93 0.364 11.1 -- -- 0.638 -- -- 0.327 -- 82.11 364 -- --
89.81 0.442 11.1 -- -- -- -- -- 0.308 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 27.96 temperature 20.0 30 > th dose dependent rect. 16 12
4 28.09 temperature 25.0 720 > th dose dependent rect. 16 1
10 28.18 radiation 1.0 720 < th dose dependent rect. 17 6
12 28.19 temperature 10.0 720 > th dose dependent rect. 3 3
18 28.29 precipitation 0.1 720 < th dose independent rect. 13 6
19 28.29 precipitation 0.1 720 < th dose dependent rect. 13 6
27 28.42 radiation 1.0 720 < th dose independent rect. 17 6
29 28.45 precipitation 0.1 720 < th dose independent rect. 22 21
30 28.45 precipitation 0.1 720 < th dose dependent rect. 22 21
32 28.48 wind 9.0 720 < th dose independent rect. 13 6
33 28.48 radiation 20.0 720 < th dose independent rect. 1 6
36 28.51 radiation 1.0 720 > th dose independent rect. 16 2
39 28.56 radiation 40.0 720 < th dose independent rect. 15 10
43 28.59 wind 1.0 720 > th dose independent rect. 13 6
48 28.60 temperature 10.0 720 > th dose dependent rect. 15 4
51 28.62 temperature 10.0 720 > th dose independent rect. 13 6
52 28.62 atmosphere 1015.0 720 < th dose independent rect. 13 6
53 28.62 temperature 10.0 720 > th dose independent rect. 19 18
54 28.62 atmosphere 995.0 720 > th dose independent rect. 19 18
55 28.63 radiation 10.0 720 < th dose independent rect. 3 4
57 28.63 precipitation 0.1 720 < th dose independent rect. 7 18
60 28.63 precipitation 0.1 720 < th dose dependent rect. 7 18
61 28.65 precipitation 0.1 720 < th dose independent rect. 13 14
62 28.65 precipitation 0.1 720 < th dose dependent rect. 13 14
65 28.67 wind 9.0 720 < th dose independent rect. 1 6
67 28.67 humidity 50.0 720 > th dose independent rect. 19 18
68 28.67 radiation 1.0 30 > th dose independent rect. 18 22
71 28.68 temperature 10.0 720 > th dose independent rect. 1 6
72 28.68 temperature 30.0 720 < th dose independent rect. 1 6
73 28.68 humidity 50.0 720 > th dose independent rect. 1 6
75 28.68 atmosphere 995.0 720 > th dose independent rect. 1 6
78 28.68 radiation 10.0 720 < th dose independent rect. 19 12
79 28.68 temperature 10.0 720 > th dose independent rect. 7 18
83 28.71 wind 9.0 720 < th dose independent rect. 22 21
84 28.72 precipitation 0.1 720 < th dose independent rect. 15 10
85 28.72 precipitation 0.1 720 < th dose dependent rect. 15 10
87 28.73 radiation 40.0 720 < th dose dependent rect. 1 6
93 28.78 precipitation 0.1 720 < th dose independent rect. 7 20
94 28.78 radiation 30.0 720 < th dose dependent rect. 3 4
95 28.78 precipitation 0.1 720 < th dose dependent rect. 7 20
96 28.79 radiation 1.0 720 > th dose independent rect. 16 13
99 28.80 wind 9.0 720 < th dose independent rect. 7 18
101 28.81 precipitation 0.1 720 < th dose independent rect. 15 4
102 28.81 humidity 80.0 30 > th dose independent rect. 5 19
103 28.81 precipitation 0.1 720 < th dose dependent rect. 15 4
105 28.83 radiation 40.0 720 < th dose independent rect. 15 4
109 28.83 radiation 20.0 720 < th dose dependent rect. 19 12
110 28.84 wind 9.0 720 < th dose independent rect. 15 4
116 28.85 precipitation 0.1 720 < th dose independent rect. 7 12
119 28.85 precipitation 0.1 720 < th dose dependent rect. 7 12
131 28.86 temperature 25.0 270 > th dose independent rect. 15 12
146 28.88 temperature 20.0 270 > th dose dependent rect. 21 5
162 28.90 humidity 50.0 720 > th dose independent rect. 3 10
163 28.90 atmosphere 1015.0 720 < th dose independent rect. 3 10
173 28.93 temperature 25.0 720 > th dose independent rect. 16 3
178 28.94 temperature 10.0 720 > th dose independent rect. 19 3
179 28.94 temperature 30.0 720 < th dose independent rect. 19 3
180 28.94 humidity 50.0 720 > th dose independent rect. 19 3
181 28.94 atmosphere 995.0 720 > th dose independent rect. 19 3
182 28.94 radiation 1.0 720 < th dose independent rect. 19 3
189 28.94 wind 9.0 720 < th dose independent rect. 7 12
192 28.94 atmosphere 995.0 720 > th dose independent rect. 1 14
194 28.94 temperature 10.0 720 > th dose independent rect. 22 21
197 28.94 radiation 1.0 720 < th dose dependent rect. 19 3
204 28.95 precipitation 0.1 720 < th dose independent rect. 7 3
206 28.95 atmosphere 995.0 270 > th dose independent rect. 18 13
209 28.95 precipitation 0.1 720 < th dose dependent rect. 7 3
212 28.96 wind 9.0 720 < th dose independent rect. 19 3
213 28.96 wind 1.0 720 > th dose independent rect. 15 4
217 28.97 wind 9.0 720 < th dose independent rect. 15 10
218 28.97 precipitation 0.1 720 < th dose independent rect. 24 10
220 28.97 wind 9.0 720 < th dose independent rect. 7 20
221 28.97 atmosphere 995.0 720 > th dose independent rect. 19 20
224 28.97 precipitation 0.1 720 < th dose dependent rect. 24 10
225 28.98 temperature 10.0 720 > th dose independent rect. 7 3
226 28.98 atmosphere 995.0 720 > th dose independent rect. 7 3
227 28.98 atmosphere 1015.0 720 < th dose independent rect. 7 3
232 28.98 precipitation 0.1 720 < th dose independent rect. 22 14
233 28.98 temperature 10.0 720 > th dose independent rect. 10 21
237 28.98 precipitation 0.1 720 < th dose dependent rect. 22 14
238 28.99 wind 9.0 720 < th dose independent rect. 7 3
239 28.99 temperature 10.0 720 > th dose independent rect. 3 10
240 28.99 atmosphere 995.0 720 > th dose independent rect. 3 10
241 28.99 temperature 10.0 720 > th dose independent rect. 13 14
245 29.00 temperature 10.0 720 > th dose independent rect. 15 10
246 29.00 wind 9.0 720 < th dose independent rect. 13 14
247 29.00 temperature 10.0 720 > th dose independent rect. 1 14
249 29.00 radiation 20.0 90 < th dose dependent rect. 5 19
251 29.02 humidity 50.0 720 > th dose independent rect. 7 3
252 29.02 atmosphere 1015.0 720 < th dose independent rect. 3 4
255 29.02 wind 9.0 720 < th dose independent rect. 22 14
256 29.02 radiation 1.0 270 < th dose independent rect. 2 22
259 29.02 temperature 10.0 10 > th dose dependent rect. 5 11
280 29.05 humidity 60.0 30 > th dose dependent rect. 19 20
287 29.07 wind 7.0 720 < th dose independent rect. 3 4
296 29.07 radiation 20.0 270 < th dose dependent rect. 17 14
297 29.08 temperature 10.0 720 > th dose independent rect. 15 4
298 29.08 humidity 70.0 720 > th dose independent rect. 3 4
299 29.08 atmosphere 1015.0 720 < th dose independent rect. 15 4
302 29.08 temperature 10.0 720 > th dose independent rect. 19 20
308 29.08 radiation 1.0 720 < th dose dependent rect. 7 15
318 29.10 temperature 10.0 720 > th dose independent rect. 3 4
319 29.10 temperature 30.0 720 < th dose independent rect. 3 4
320 29.10 humidity 50.0 720 > th dose independent rect. 3 4
322 29.10 atmosphere 995.0 720 > th dose independent rect. 3 4
324 29.10 wind 9.0 720 < th dose independent rect. 19 18
325 29.10 temperature 10.0 720 > th dose independent rect. 7 20
344 29.13 wind 9.0 720 < th dose dependent rect. 7 3
352 29.14 temperature 10.0 720 > th dose independent rect. 12 10
353 29.14 temperature 10.0 270 > th dose independent rect. 7 11
354 29.14 atmosphere 1015.0 270 < th dose independent rect. 7 11
355 29.14 temperature 10.0 270 > th dose independent rect. 18 13
356 29.14 humidity 50.0 270 > th dose independent rect. 18 13
359 29.14 temperature 10.0 720 > th dose independent rect. 22 14
360 29.14 atmosphere 995.0 720 > th dose independent rect. 22 14
370 29.15 radiation 1.0 30 > th dose independent rect. 5 11
385 29.15 humidity 50.0 90 > th dose dependent rect. 19 14
387 29.15 humidity 70.0 30 > th dose dependent rect. 5 19
392 29.16 temperature 10.0 720 > th dose independent rect. 24 10
393 29.16 atmosphere 995.0 720 > th dose independent rect. 24 10
396 29.16 temperature 10.0 720 > th dose independent rect. 10 14
405 29.16 humidity 50.0 10 > th dose dependent rect. 17 22
406 29.17 temperature 25.0 270 > th dose independent sin 14 NA
408 29.17 wind 9.0 720 < th dose independent rect. 24 10
410 29.17 humidity 80.0 30 > th dose independent rect. 5 23
413 29.17 humidity 90.0 10 < th dose dependent rect. 9 9
417 29.17 humidity 90.0 10 < th dose dependent rect. 24 18
430 29.18 wind 9.0 270 < th dose independent rect. 18 13
433 29.18 humidity 80.0 10 > th dose independent rect. 18 20
438 29.19 radiation 1.0 720 > th dose independent rect. 7 3
439 29.19 humidity 50.0 720 > th dose independent rect. 24 10
446 29.20 atmosphere 995.0 30 > th dose independent rect. 9 10
464 29.21 temperature 30.0 720 < th dose independent rect. 19 12
491 29.21 radiation 1.0 270 < th dose dependent rect. 2 21
496 29.22 precipitation 0.1 720 < th dose independent rect. 1 6
497 29.22 precipitation 0.1 720 < th dose independent rect. 4 9
503 29.22 precipitation 0.1 720 < th dose dependent rect. 1 6
505 29.22 precipitation 0.1 720 < th dose dependent rect. 4 9
508 29.22 humidity 90.0 10 < th dose dependent rect. 20 22
514 29.23 radiation 10.0 90 < th dose independent rect. 5 19
523 29.23 radiation 40.0 30 < th dose dependent rect. 11 13
530 29.24 humidity 80.0 30 > th dose independent rect. 3 21
539 29.25 radiation 1.0 720 > th dose independent rect. 7 11
553 29.26 humidity 80.0 10 < th dose independent rect. 22 20
556 29.26 humidity 80.0 10 < th dose independent rect. 20 22
565 29.27 humidity 90.0 30 < th dose independent rect. 9 10
577 29.27 humidity 80.0 30 > th dose independent rect. 1 23
602 29.29 precipitation 0.1 720 < th dose independent rect. 3 4
612 29.29 precipitation 0.1 720 < th dose dependent rect. 3 4
624 29.30 humidity 80.0 10 > th dose independent rect. 3 23
627 29.30 temperature 10.0 270 > th dose dependent rect. 3 10
633 29.31 wind 1.0 30 > th dose independent rect. 9 10
657 29.32 wind 9.0 270 < th dose independent rect. 2 11
680 29.33 humidity 90.0 10 < th dose dependent rect. 7 11
685 29.33 humidity 70.0 30 > th dose dependent rect. 5 23
700 29.34 radiation 40.0 90 < th dose dependent rect. 17 22
701 29.34 humidity 50.0 10 > th dose dependent rect. 3 23
703 29.34 radiation 30.0 270 < th dose dependent rect. 1 23
716 29.36 wind 1.0 720 > th dose independent rect. 19 3
720 29.36 radiation 20.0 90 < th dose independent rect. 17 22
737 29.37 temperature 10.0 30 > th dose independent rect. 9 10
739 29.37 atmosphere 1015.0 30 < th dose independent rect. 9 10
742 29.37 radiation 40.0 270 < th dose independent rect. 14 13
744 29.37 temperature 10.0 30 > th dose independent rect. 19 14
745 29.37 temperature 30.0 30 < th dose independent rect. 19 14
746 29.37 humidity 50.0 30 > th dose independent rect. 19 14
748 29.37 atmosphere 995.0 30 > th dose independent rect. 19 14
774 29.38 radiation 1.0 720 < th dose independent rect. 6 16
797 29.39 atmosphere 995.0 270 > th dose independent rect. 6 11
836 29.40 radiation 1.0 720 > th dose independent rect. 15 21
846 29.40 radiation 1.0 720 < th dose dependent rect. 16 13
865 29.41 wind 9.0 30 < th dose independent rect. 19 14
871 29.41 humidity 80.0 90 < th dose independent rect. 21 20
875 29.41 humidity 50.0 720 > th dose dependent rect. 19 3
897 29.42 humidity 50.0 720 > th dose independent rect. 1 14
913 29.43 precipitation 0.1 720 < th dose independent rect. 19 3
925 29.43 radiation 1.0 720 > th dose independent rect. 13 23
928 29.43 precipitation 0.1 720 < th dose dependent rect. 19 3
948 29.44 radiation 1.0 720 > th dose independent rect. 17 17
950 29.44 humidity 80.0 10 < th dose independent rect. 9 23
954 29.44 humidity 50.0 30 > th dose dependent rect. 1 23
958 29.45 humidity 80.0 90 < th dose independent rect. 23 18
968 29.45 wind 9.0 30 < th dose dependent rect. 16 13
996 29.46 humidity 80.0 10 < th dose independent rect. 13 23