Os02g0104000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0104000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 336.72 | 0.862 | 5.75 | 0.842 | 0.813 | 3.3 | 0.12 | 0.452 | -0.242 | 10.7 | 25.1 | 1482 | -- | -- |
| 336.88 | 0.855 | 5.74 | 0.928 | 0.82 | 3.27 | 0.128 | -- | -0.217 | 10.7 | 25.22 | 1500 | -- | -- |
| 336.76 | 0.855 | 5.75 | 0.851 | 0.822 | 3.31 | -- | 0.468 | -0.238 | 10.7 | 25.16 | 1500 | -- | -- |
| 336.92 | 0.855 | 5.74 | 0.931 | 0.82 | 3.26 | -- | -- | -0.219 | 10.8 | 25.25 | 1510 | -- | -- |
| 352.4 | 0.874 | 5.74 | 1.06 | -- | 2.86 | -- | -0.133 | -0.194 | -- | 26.16 | 2365 | -- | -- |
| 479.14 | 1.03 | 5.9 | -0.064 | 0.84 | -- | 0.114 | -- | -0.912 | 11.1 | -- | -- | -- | -- |
| 479.19 | 1.03 | 5.9 | -0.0591 | 0.839 | -- | -- | -- | -0.912 | 11.1 | -- | -- | -- | -- |
| 351.82 | 0.874 | 5.74 | 1.15 | -- | 3 | -- | -- | -0.129 | -- | 25.95 | 2353 | -- | -- |
| 356.07 | 0.879 | 5.79 | -- | 0.775 | 2.76 | -- | -- | -0.41 | 10.5 | 25.48 | 1392 | -- | -- |
| 523.12 | 1.07 | 5.92 | -0.0789 | -- | -- | -- | -- | -0.919 | -- | -- | -- | -- | -- |
| 479.28 | 1.02 | 5.9 | -- | 0.84 | -- | -- | -- | -0.905 | 11.1 | -- | -- | -- | -- |
| 363.83 | 0.888 | 5.79 | -- | -- | 2.93 | -- | -- | -0.351 | -- | 26.4 | 848 | -- | -- |
| 523.29 | 1.07 | 5.92 | -- | -- | -- | -- | -- | -0.91 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 323.62 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 9 | 324.85 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 30 | 326.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 13 |
| 31 | 326.01 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 6 |
| 70 | 326.89 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 97 | 327.31 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 105 | 327.45 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 18 |
| 125 | 327.75 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 202 | 329.29 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 383 | 332.13 | temperature | 15 | 1440 | > th | dose dependent | sin | 10 | NA |
| 416 | 332.64 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 526 | 333.88 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 626 | 334.57 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 720 | 335.18 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 775 | 335.42 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 21 |