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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0101900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.44 (0.0222) R2 : 0.0224
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.151 (0.0468) R2dN8 : 0.029 R2N8 : 0.0224
σ : 0.419
deviance : 80.56
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
70.21 0.394 3.56 -0.551 0.306 2.38 -0.156 -12 -0.12 2.39 999.8 361 -- --
72.03 0.398 3.43 0.157 0.324 0.222 -0.123 -- -0.122 2.31 999.8 361 -- --
70.3 0.39 3.56 -0.545 0.306 2.37 -- -12 -0.119 2.39 999.8 360 -- --
72.08 0.395 3.43 0.16 0.32 0.239 -- -- -0.12 2.34 999.8 300 -- --
75.72 0.405 3.57 -0.583 -- 2.5 -- -12.7 -0.111 -- 999.8 371 -- --
73.33 0.401 3.44 0.195 0.317 -- -0.142 -- -0.136 2.34 -- -- -- --
73.41 0.401 3.44 0.199 0.317 -- -- -- -0.136 2.33 -- -- -- --
78.1 0.412 3.43 0.168 -- 0.238 -- -- -0.115 -- 999.9 300 -- --
72.73 0.397 3.44 -- 0.322 0.27 -- -- -0.136 2.38 999.9 300 -- --
79.36 0.416 3.43 0.213 -- -- -- -- -0.128 -- -- -- -- --
74.45 0.404 3.44 -- 0.321 -- -- -- -0.158 2.34 -- -- -- --
78.88 0.414 3.43 -- -- 0.263 -- -- -0.132 -- 999.9 298 -- --
80.56 0.419 3.44 -- -- -- -- -- -0.151 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 65.81 wind 1.0 30 < th dose dependent rect. 24 3
2 65.85 wind 1.0 10 < th dose dependent rect. 22 5
4 65.93 wind 1.0 10 < th dose dependent rect. 14 13
19 66.49 wind 1.0 10 < th dose independent rect. 23 4
21 66.67 wind 1.0 10 < th dose independent rect. 14 13
23 66.71 wind 1.0 10 < th dose independent rect. 17 10
36 66.88 wind 1.0 10 < th dose dependent rect. 6 21
44 67.52 wind 1.0 10 < th dose independent rect. 8 19
46 67.56 wind 1.0 10 < th dose independent rect. 6 21
62 67.70 wind 7.0 1440 > th dose dependent rect. 1 2
63 67.71 wind 7.0 1440 > th dose independent rect. 1 2
89 68.25 wind 1.0 14400 < th dose dependent rect. 2 1
136 69.38 temperature 15.0 10 > th dose independent rect. 3 23
144 69.43 wind 1.0 10 < th dose dependent sin 18 NA
147 69.53 atmosphere 1000.0 10 > th dose independent rect. 3 9
152 69.59 wind 1.0 14400 < th dose independent rect. 2 1
159 69.61 wind 1.0 10 < th dose independent sin 17 NA
170 69.66 humidity 90.0 1440 < th dose independent rect. 11 3
172 69.69 wind 1.0 14400 > th dose independent rect. 1 2
173 69.69 humidity 90.0 1440 > th dose dependent rect. 11 3
177 69.72 humidity 90.0 1440 > th dose independent rect. 12 2
196 69.90 precipitation 0.1 720 > th dose independent rect. 9 10
197 69.90 precipitation 0.1 720 < th dose independent rect. 13 14
199 69.90 precipitation 0.1 720 < th dose dependent rect. 13 14
202 69.92 atmosphere 1000.0 10 > th dose independent rect. 3 23
203 69.93 temperature 30.0 10 < th dose dependent rect. 2 1
206 69.94 precipitation 0.1 720 > th dose independent rect. 12 7
210 69.95 atmosphere 1000.0 30 > th dose independent rect. 3 6
214 69.97 humidity 90.0 720 > th dose dependent rect. 11 8
215 69.98 precipitation 0.1 720 > th dose independent sin 22 NA
222 70.00 atmosphere 1000.0 1440 > th dose independent rect. 1 1
225 70.00 precipitation 0.1 720 > th dose dependent rect. 9 10
233 70.02 precipitation 0.1 720 > th dose dependent sin 22 NA
239 70.03 atmosphere 1005.0 30 > th dose independent rect. 1 2
245 70.04 temperature 25.0 10 < th dose independent rect. 2 1
252 70.04 precipitation 0.1 720 > th dose dependent rect. 12 7
254 70.05 atmosphere 1000.0 1440 < th dose independent rect. 1 1
262 70.06 atmosphere 1000.0 30 > th dose independent rect. 3 20
277 70.07 humidity 80.0 90 > th dose dependent rect. 3 20
285 70.09 atmosphere 1000.0 270 > th dose independent rect. 3 1
290 70.11 humidity 80.0 10 > th dose independent rect. 2 1
295 70.12 radiation 20.0 10 < th dose dependent rect. 3 23
297 70.13 radiation 10.0 30 < th dose independent rect. 3 23
299 70.14 temperature 10.0 10 > th dose independent rect. 2 1
302 70.14 humidity 50.0 10 > th dose independent rect. 2 1
305 70.14 atmosphere 995.0 10 > th dose independent rect. 2 1
306 70.14 atmosphere 1010.0 10 < th dose independent rect. 2 1
308 70.14 radiation 1.0 10 < th dose independent rect. 2 1
313 70.14 precipitation 0.1 10 < th dose independent rect. 2 1
322 70.14 atmosphere 1015.0 10 < th dose dependent rect. 2 1
323 70.14 radiation 1.0 10 < th dose dependent rect. 2 1
328 70.14 precipitation 0.1 10 < th dose dependent rect. 2 1
335 70.15 humidity 50.0 4320 > th dose dependent rect. 14 1
337 70.15 wind 9.0 10 < th dose dependent rect. 13 14
342 70.16 humidity 50.0 10 > th dose dependent rect. 2 1
346 70.17 precipitation 0.1 270 < th dose independent rect. 4 23
349 70.17 precipitation 0.1 270 < th dose dependent rect. 4 23
353 70.18 atmosphere 1000.0 30 > th dose independent rect. 3 17
358 70.19 humidity 90.0 4320 < th dose dependent rect. 14 1
361 70.20 humidity 70.0 4320 > th dose independent rect. 16 1
364 70.20 precipitation 0.1 720 < th dose independent rect. 15 10
370 70.20 precipitation 0.1 720 < th dose dependent rect. 15 10
380 70.22 atmosphere 1000.0 270 < th dose independent rect. 24 4
389 70.22 humidity 70.0 4320 > th dose dependent rect. 13 5
398 70.23 atmosphere 1000.0 90 < th dose dependent rect. 1 4
404 70.24 atmosphere 995.0 10 > th dose dependent rect. 2 1
405 70.24 humidity 70.0 4320 > th dose dependent rect. 16 2
409 70.25 wind 9.0 10 < th dose independent rect. 3 23
411 70.25 humidity 60.0 4320 > th dose dependent rect. 14 3
439 70.28 temperature 10.0 10 > th dose dependent rect. 2 1
446 70.29 wind 1.0 30 > th dose independent rect. 2 1
450 70.29 atmosphere 1000.0 90 > th dose independent rect. 3 4
460 70.30 humidity 80.0 4320 < th dose independent rect. 13 6
466 70.31 atmosphere 1000.0 270 < th dose independent rect. 23 20
476 70.32 precipitation 0.1 720 > th dose independent rect. 14 1
480 70.32 atmosphere 1000.0 270 < th dose independent rect. 15 19
485 70.32 precipitation 0.1 720 > th dose dependent rect. 14 1
494 70.32 humidity 70.0 10 > th dose dependent rect. 3 21
501 70.33 temperature 25.0 4320 < th dose independent rect. 3 1
531 70.33 wind 9.0 90 < th dose dependent rect. 13 14
560 70.35 humidity 80.0 10 > th dose dependent rect. 4 19
568 70.37 temperature 25.0 4320 > th dose independent rect. 3 1
572 70.37 precipitation 0.1 1440 < th dose independent rect. 9 7
583 70.37 precipitation 0.1 1440 < th dose dependent rect. 9 7
591 70.38 humidity 70.0 4320 > th dose independent rect. 13 5
599 70.39 humidity 70.0 4320 < th dose independent rect. 16 1
616 70.39 precipitation 0.1 1440 > th dose dependent rect. 5 11
617 70.40 precipitation 0.1 4320 > th dose independent rect. 16 2
640 70.41 humidity 90.0 270 > th dose dependent rect. 13 16
646 70.42 humidity 90.0 720 > th dose independent rect. 11 8
664 70.43 precipitation 0.1 4320 < th dose independent rect. 16 2
666 70.43 wind 5.0 90 < th dose independent rect. 23 4
671 70.43 precipitation 0.1 4320 < th dose independent rect. 10 9
678 70.43 wind 1.0 4320 < th dose dependent rect. 22 1
680 70.43 precipitation 0.1 4320 < th dose dependent rect. 16 2
686 70.43 precipitation 0.1 4320 < th dose dependent rect. 10 9
691 70.44 wind 1.0 10 > th dose independent sin 17 NA
696 70.44 precipitation 0.1 4320 > th dose independent rect. 10 9
698 70.44 atmosphere 1000.0 90 < th dose independent rect. 24 11
722 70.45 atmosphere 1010.0 90 < th dose independent rect. 16 15
729 70.45 humidity 50.0 270 > th dose dependent rect. 15 15
746 70.46 humidity 90.0 270 > th dose dependent rect. 16 13
755 70.47 humidity 90.0 270 > th dose independent rect. 13 16
773 70.48 atmosphere 1000.0 270 > th dose independent rect. 1 8
788 70.48 atmosphere 1000.0 10 < th dose dependent rect. 24 8
803 70.49 atmosphere 1000.0 10 < th dose independent rect. 1 9
817 70.50 atmosphere 1000.0 14400 > th dose independent rect. 11 1
818 70.50 atmosphere 1000.0 14400 < th dose independent rect. 11 1
837 70.50 precipitation 0.1 720 > th dose dependent rect. 9 18
840 70.51 atmosphere 1000.0 270 < th dose independent sin 9 NA
851 70.51 precipitation 0.1 4320 < th dose independent rect. 5 14
855 70.51 wind 1.0 270 < th dose dependent rect. 22 1
863 70.51 precipitation 0.1 4320 < th dose dependent rect. 5 14
881 70.52 precipitation 0.1 4320 > th dose independent rect. 5 14
897 70.52 precipitation 0.1 720 > th dose dependent rect. 12 15
916 70.53 wind 1.0 4320 < th dose dependent rect. 19 4
936 70.54 atmosphere 1000.0 14400 > th dose independent rect. 4 1
938 70.54 atmosphere 1000.0 14400 < th dose independent rect. 4 1
956 70.54 atmosphere 1000.0 270 > th dose independent rect. 24 22
998 70.55 temperature 15.0 270 > th dose independent rect. 24 23
1000 70.55 atmosphere 1000.0 270 < th dose independent rect. 18 23