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Os02g0101700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to HECT ubiquitin-protein ligase 3 (KAKTUS protein).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0155) R2 : 0.051
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.161 (0.0326) R2dN8 : 0.0658 R2N8 : 0.051
σ : 0.291
deviance : 38.93
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.83 0.248 11.8 1.11 0.0594 -0.339 0.157 1.9 0.425 11.1 19.99 1569 -- --
29.98 0.255 11.8 0.835 0.0464 -0.446 0.089 -- 0.385 11.7 12.71 22944 -- --
27.9 0.246 11.8 1.12 0.0623 -0.344 -- 1.92 0.427 12.7 19.98 1617 -- --
30.01 0.255 11.8 0.847 0.0536 -0.442 -- -- 0.376 11.9 12.41 23519 -- --
28.14 0.247 11.8 1.13 -- -0.347 -- 1.91 0.429 -- 20.42 1573 -- --
32.92 0.269 11.8 0.459 0.0646 -- 0.153 -- 0.212 10.9 -- -- -- --
33 0.269 11.8 0.465 0.0652 -- -- -- 0.213 11.9 -- -- -- --
30.16 0.256 11.8 0.857 -- -0.441 -- -- 0.376 -- 11.79 23835 -- --
36.28 0.281 11.9 -- 0.0655 0.224 -- -- 0.0754 12.6 25.8 47520 -- --
33.27 0.27 11.8 0.463 -- -- -- -- 0.213 -- -- -- -- --
38.71 0.291 11.9 -- 0.0597 -- -- -- 0.162 11.5 -- -- -- --
36.57 0.282 11.9 -- -- 0.22 -- -- 0.0757 -- 25.8 47520 -- --
38.93 0.291 11.9 -- -- -- -- -- 0.161 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 26.99 radiation 1 14400 < th dose dependent rect. 21 8
2 27.00 temperature 25 1440 > th dose dependent sin 14 NA
3 27.00 radiation 1 14400 < th dose dependent rect. 19 10
4 27.01 atmosphere 1005 43200 < th dose independent rect. 11 1
6 27.03 wind 7 14400 > th dose independent rect. 10 2
8 27.03 temperature 25 1440 > th dose dependent rect. 14 12
11 27.04 temperature 25 1440 > th dose dependent rect. 16 10
18 27.05 atmosphere 1005 43200 > th dose independent rect. 10 2
19 27.05 wind 7 14400 > th dose dependent rect. 9 3
29 27.07 wind 7 14400 < th dose independent rect. 10 2
57 27.17 humidity 90 14400 > th dose dependent rect. 24 12
58 27.18 atmosphere 1005 43200 > th dose independent rect. 6 8
61 27.18 humidity 90 14400 > th dose dependent rect. 1 10
67 27.19 atmosphere 1005 14400 > th dose independent rect. 16 1
71 27.19 atmosphere 1005 43200 < th dose independent rect. 6 9
73 27.19 humidity 90 14400 > th dose dependent rect. 2 7
80 27.20 wind 5 43200 > th dose independent rect. 23 1
87 27.20 atmosphere 1005 43200 < th dose independent rect. 8 6
126 27.22 wind 5 43200 < th dose independent rect. 23 1
147 27.23 atmosphere 1005 43200 > th dose independent sin 2 NA
172 27.24 atmosphere 1005 43200 < th dose independent sin 2 NA
197 27.25 humidity 70 43200 > th dose independent rect. 19 1
254 27.27 atmosphere 1015 43200 < th dose dependent rect. 8 1
280 27.28 atmosphere 995 43200 > th dose dependent rect. 8 1
296 27.29 humidity 90 14400 > th dose independent rect. 23 1
317 27.30 humidity 70 43200 < th dose independent rect. 19 1
339 27.31 atmosphere 1005 43200 < th dose independent rect. 8 1
401 27.32 humidity 90 14400 > th dose dependent sin 6 NA
421 27.33 wind 9 14400 > th dose independent rect. 23 13
441 27.33 temperature 25 1440 > th dose dependent rect. 16 2
492 27.34 atmosphere 1010 43200 < th dose dependent rect. 13 1
528 27.35 temperature 25 1440 < th dose independent rect. 17 7
603 27.36 atmosphere 1005 43200 < th dose independent rect. 18 21
606 27.36 atmosphere 1005 43200 > th dose independent rect. 19 22
609 27.36 atmosphere 1005 43200 < th dose independent rect. 16 22
615 27.36 atmosphere 1005 43200 < th dose independent rect. 13 23
625 27.36 humidity 90 14400 > th dose dependent rect. 4 3
652 27.37 atmosphere 1005 43200 < th dose independent no NA NA
669 27.37 atmosphere 1005 43200 < th dose independent rect. 16 20
688 27.37 atmosphere 1005 43200 < th dose independent rect. 6 23
726 27.38 atmosphere 1005 43200 > th dose independent no NA NA
728 27.38 atmosphere 1005 14400 < th dose independent rect. 16 1
752 27.38 atmosphere 1005 43200 > th dose independent rect. 15 21
813 27.39 atmosphere 1005 43200 < th dose independent rect. 3 2
818 27.39 temperature 25 1440 > th dose independent rect. 17 7
820 27.39 temperature 25 1440 > th dose independent rect. 16 9
856 27.39 atmosphere 1005 43200 > th dose independent rect. 8 23
864 27.39 humidity 90 14400 > th dose dependent rect. 5 1
929 27.40 atmosphere 1010 43200 < th dose dependent sin 0 NA
971 27.41 atmosphere 1005 43200 > th dose independent rect. 19 1
972 27.41 atmosphere 1005 43200 < th dose independent rect. 13 1
988 27.41 radiation 1 14400 > th dose independent rect. 18 13
989 27.41 radiation 1 14400 < th dose independent rect. 18 13