Os02g0101000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Amino acid/polyamine transporter II family protein.
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Os02g0101000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Amino acid/polyamine transporter II family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 93.35 | 0.454 | 8.76 | 0.267 | 2.13 | 0.555 | -0.469 | -2.81 | -0.0389 | 2 | 90.76 | 312 | -- | -- |
| 101.17 | 0.468 | 8.76 | 0.183 | 2.25 | 1.15 | -0.835 | -- | -0.163 | 2.16 | 94.91 | 266 | -- | -- |
| 94.07 | 0.452 | 8.76 | 0.295 | 2.12 | 0.555 | -- | -2.92 | -0.0305 | 1.97 | 90.55 | 305 | -- | -- |
| 102.91 | 0.472 | 8.74 | 0.241 | 2.18 | 1.71 | -- | -- | -0.0733 | 2.03 | 94.92 | 264 | -- | -- |
| 170.14 | 0.608 | 8.71 | 0.293 | -- | 1.96 | -- | -1.48 | 0.0748 | -- | 68.67 | 2 | -- | -- |
| 108.42 | 0.488 | 8.76 | 0.187 | 2.22 | -- | -1.02 | -- | -0.142 | 2.27 | -- | -- | -- | -- |
| 112.19 | 0.496 | 8.76 | 0.216 | 2.21 | -- | -- | -- | -0.136 | 2.19 | -- | -- | -- | -- |
| 178.11 | 0.622 | 8.71 | 0.235 | -- | 1.94 | -- | -- | 0.0526 | -- | 67.16 | 2 | -- | -- |
| 104.01 | 0.475 | 8.75 | -- | 2.15 | 1.79 | -- | -- | -0.103 | 2.01 | 94.88 | 238 | -- | -- |
| 404.6 | 0.94 | 8.74 | 0.309 | -- | -- | -- | -- | -0.0825 | -- | -- | -- | -- | -- |
| 113.42 | 0.498 | 8.76 | -- | 2.22 | -- | -- | -- | -0.16 | 2.2 | -- | -- | -- | -- |
| 179.57 | 0.624 | 8.71 | -- | -- | 1.94 | -- | -- | 0.0268 | -- | 67.14 | 2 | -- | -- |
| 407.12 | 0.942 | 8.74 | -- | -- | -- | -- | -- | -0.117 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.07 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 10 |
| 2 | 83.09 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 12 |
| 5 | 83.14 | temperature | 25.0 | 10 | < th | dose independent | rect. | 3 | 11 |
| 15 | 83.55 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 19 | 83.79 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 14 |
| 20 | 83.82 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 24 | 84.01 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 27 | 84.13 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 28 | 84.16 | temperature | 30.0 | 30 | < th | dose dependent | sin | 2 | NA |
| 44 | 84.53 | temperature | 25.0 | 90 | < th | dose independent | sin | 3 | NA |
| 63 | 84.90 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 10 |
| 65 | 84.92 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 66 | 84.95 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 12 |
| 141 | 86.26 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 143 | 86.26 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 184 | 87.05 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 2 | 2 |
| 185 | 87.05 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 2 | 2 |
| 212 | 87.54 | humidity | 90.0 | 90 | > th | dose independent | sin | 2 | NA |
| 214 | 87.55 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 24 | 12 |
| 240 | 87.89 | temperature | 10.0 | 10 | > th | dose dependent | sin | 1 | NA |
| 242 | 87.90 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 16 |
| 251 | 87.95 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 11 |
| 257 | 87.99 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 14 |
| 264 | 88.04 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 9 |
| 276 | 88.08 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 1 | 11 |
| 300 | 88.23 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 18 |
| 322 | 88.37 | humidity | 80.0 | 90 | > th | dose dependent | sin | 3 | NA |
| 326 | 88.39 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 11 |
| 327 | 88.40 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 328 | 88.40 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 24 | 15 |
| 389 | 88.77 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 23 | 5 |
| 393 | 88.79 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 23 | 5 |
| 396 | 88.81 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 20 |
| 436 | 89.08 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 1 | 16 |
| 461 | 89.26 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 24 | 12 |
| 541 | 89.69 | radiation | 1.0 | 270 | > th | dose independent | rect. | 18 | 22 |
| 545 | 89.74 | radiation | 1.0 | 720 | < th | dose independent | rect. | 24 | 12 |
| 582 | 89.95 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 599 | 90.07 | precipitation | 0.1 | 270 | < th | dose independent | sin | 1 | NA |
| 600 | 90.07 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 1 | NA |
| 605 | 90.10 | radiation | 1.0 | 270 | > th | dose independent | rect. | 5 | 11 |
| 647 | 90.27 | radiation | 1.0 | 720 | < th | dose dependent | sin | 6 | NA |
| 649 | 90.28 | humidity | 90.0 | 90 | < th | dose independent | sin | 1 | NA |
| 667 | 90.36 | radiation | 1.0 | 720 | < th | dose independent | rect. | 24 | 15 |
| 679 | 90.41 | radiation | 1.0 | 270 | < th | dose dependent | sin | 4 | NA |
| 696 | 90.49 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 2 | 11 |
| 712 | 90.55 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 9 |
| 715 | 90.55 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 9 |
| 747 | 90.64 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 24 | 23 |
| 866 | 91.05 | temperature | 15.0 | 720 | > th | dose independent | rect. | 3 | 6 |
| 878 | 91.07 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 15 |
| 923 | 91.18 | humidity | 90.0 | 10 | < th | dose independent | sin | 1 | NA |
| 937 | 91.21 | humidity | 90.0 | 90 | < th | dose independent | rect. | 6 | 11 |
| 970 | 91.28 | humidity | 90.0 | 270 | < th | dose independent | sin | 23 | NA |
| 971 | 91.28 | radiation | 1.0 | 270 | < th | dose independent | sin | 4 | NA |