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Os02g0100700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : FG-GAP repeat containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.6 (0.0114) R2 : 0.0597
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.129 (0.024) R2dN8 : 0.0771 R2N8 : 0.0597
σ : 0.215
deviance : 21.15
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
15.71 0.186 11.5 0.225 0.171 -0.455 0.282 -0.263 0.169 2.23 78 1366 -- --
15.76 0.185 11.5 0.244 0.165 -0.473 0.269 -- 0.174 2.26 78.02 1382 -- --
15.95 0.186 11.6 0.228 0.169 -0.453 -- -0.202 0.159 2.84 78.18 1382 -- --
15.98 0.186 11.5 0.238 0.17 -0.467 -- -- 0.171 3 78.5 1382 -- --
16.64 0.19 11.5 0.231 -- -0.517 -- -0.0657 0.173 -- 78.74 1662 -- --
18.47 0.201 11.6 0.223 0.14 -- 0.234 -- 0.152 1.92 -- -- -- --
18.62 0.202 11.6 0.215 0.146 -- -- -- 0.15 2.79 -- -- -- --
16.65 0.19 11.5 0.236 -- -0.522 -- -- 0.172 -- 78.73 1662 -- --
17.45 0.195 11.6 -- 0.171 -0.44 -- -- 0.147 2.94 78 1382 -- --
19.86 0.208 11.5 0.221 -- -- -- -- 0.154 -- -- -- -- --
19.84 0.208 11.6 -- 0.15 -- -- -- 0.126 2.8 -- -- -- --
18.11 0.198 11.6 -- -- -0.505 -- -- 0.146 -- 78.15 1669 -- --
21.15 0.215 11.6 -- -- -- -- -- 0.129 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 14.89 humidity 60 720 > th dose dependent rect. 18 1
4 15.09 humidity 80 14400 > th dose independent rect. 4 1
5 15.12 humidity 80 14400 < th dose independent rect. 4 1
18 15.20 humidity 50 720 > th dose dependent rect. 15 14
34 15.31 humidity 60 720 > th dose independent rect. 17 2
46 15.34 humidity 80 14400 < th dose dependent rect. 5 1
67 15.43 humidity 80 720 < th dose dependent sin 13 NA
70 15.44 temperature 30 720 < th dose independent rect. 18 1
73 15.44 humidity 80 720 < th dose dependent rect. 15 14
94 15.50 humidity 50 720 > th dose dependent rect. 16 18
97 15.51 humidity 50 720 > th dose dependent sin 14 NA
112 15.52 humidity 80 14400 < th dose dependent rect. 2 1
113 15.52 humidity 80 14400 < th dose dependent rect. 2 4
162 15.59 humidity 60 720 > th dose independent rect. 17 16
169 15.60 humidity 90 1440 < th dose dependent rect. 18 1
174 15.60 humidity 50 720 > th dose dependent rect. 11 18
186 15.61 humidity 50 720 > th dose dependent rect. 9 20
188 15.62 humidity 80 1440 < th dose independent rect. 23 21
192 15.63 humidity 80 1440 < th dose independent rect. 11 1
205 15.64 humidity 80 1440 > th dose independent rect. 11 1
208 15.64 wind 1 14400 > th dose dependent rect. 12 1
217 15.65 humidity 70 720 > th dose independent rect. 15 14
218 15.65 humidity 80 1440 < th dose independent rect. 3 17
228 15.66 wind 9 14400 < th dose dependent rect. 12 1
236 15.67 humidity 80 1440 < th dose independent rect. 5 15
246 15.68 wind 3 14400 > th dose independent rect. 12 1
264 15.70 humidity 70 720 > th dose independent rect. 15 5
265 15.70 humidity 60 720 > th dose independent rect. 17 12
306 15.74 humidity 80 1440 > th dose independent rect. 3 18
307 15.74 humidity 80 1440 > th dose independent rect. 1 20
329 15.76 humidity 80 1440 < th dose independent sin 1 NA
332 15.76 humidity 80 1440 > th dose independent rect. 6 15
363 15.78 wind 3 14400 < th dose independent rect. 12 1
373 15.78 wind 3 43200 < th dose dependent rect. 21 7
403 15.80 humidity 50 720 > th dose dependent rect. 8 15
405 15.80 humidity 90 720 > th dose dependent rect. 6 18
413 15.81 wind 3 43200 < th dose dependent rect. 20 9
426 15.82 humidity 80 1440 > th dose independent sin 0 NA
446 15.83 humidity 60 720 > th dose independent sin 12 NA
493 15.84 humidity 70 1440 > th dose dependent rect. 4 16
517 15.86 humidity 60 720 > th dose independent rect. 17 10
519 15.86 humidity 80 1440 < th dose independent rect. 3 12
544 15.87 humidity 80 1440 < th dose independent rect. 6 9
546 15.87 humidity 80 1440 < th dose independent rect. 9 11
560 15.87 humidity 50 720 > th dose dependent rect. 11 10
567 15.88 wind 7 14400 > th dose independent rect. 12 1
572 15.88 humidity 70 10 > th dose independent rect. 18 11
579 15.88 humidity 80 1440 < th dose independent rect. 6 20
585 15.88 humidity 80 1440 < th dose independent rect. 16 23
602 15.89 wind 7 14400 < th dose independent rect. 12 1
603 15.89 wind 3 43200 < th dose independent rect. 20 1
605 15.89 humidity 80 1440 > th dose independent rect. 9 12
624 15.89 humidity 80 1440 < th dose independent rect. 9 23
625 15.89 humidity 90 720 > th dose dependent sin 21 NA
672 15.90 humidity 80 1440 < th dose independent rect. 14 23
692 15.91 humidity 80 1440 < th dose independent no NA NA
745 15.92 humidity 80 1440 < th dose independent rect. 19 23
773 15.93 humidity 60 720 > th dose independent rect. 17 8
785 15.93 humidity 80 1440 > th dose independent rect. 9 23
789 15.93 humidity 80 1440 > th dose dependent rect. 10 3
818 15.94 humidity 80 1440 > th dose independent rect. 6 20
827 15.94 humidity 70 1440 > th dose dependent rect. 11 1
849 15.95 wind 3 43200 > th dose independent rect. 20 1
854 15.95 humidity 80 1440 > th dose independent rect. 3 12
893 15.96 humidity 80 1440 > th dose independent rect. 6 9
902 15.96 humidity 80 720 > th dose independent rect. 10 19
910 15.96 humidity 80 1440 > th dose independent rect. 16 23
915 15.96 humidity 70 1440 > th dose dependent sin 0 NA
934 15.97 humidity 80 1440 > th dose independent no NA NA
936 15.97 wind 3 14400 < th dose independent rect. 2 2
937 15.97 humidity 70 720 < th dose independent rect. 14 6
946 15.97 temperature 30 720 < th dose independent rect. 17 12
968 15.97 humidity 80 1440 > th dose independent rect. 14 23
998 15.98 wind 3 43200 < th dose independent rect. 19 9