Os01g0978400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : NAD-dependent epimerase/dehydratase family protein.
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Os01g0978400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : NAD-dependent epimerase/dehydratase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 116.87 | 0.508 | 8.89 | 0.14 | 1.7 | -1.08 | -1.97 | -0.624 | -0.374 | 13.9 | 28.95 | 12 | -- | -- |
| 117.27 | 0.508 | 8.91 | 0.036 | 1.71 | -1.06 | -1.75 | -- | -0.394 | 14 | 29.36 | 12 | -- | -- |
| 126.95 | 0.525 | 8.93 | -0.188 | 1.76 | -0.959 | -- | 1.15 | -0.433 | 14 | 29.5 | 5 | -- | -- |
| 128.93 | 0.532 | 8.91 | -0.0036 | 1.74 | -0.997 | -- | -- | -0.4 | 14 | 28.41 | 11 | -- | -- |
| 246.77 | 0.736 | 9.01 | -0.584 | -- | -2.73 | -- | 0.816 | -0.778 | -- | 30.1 | 2 | -- | -- |
| 132.81 | 0.54 | 8.86 | 0.285 | 2.06 | -- | -1.64 | -- | -0.183 | 14 | -- | -- | -- | -- |
| 143.07 | 0.56 | 8.86 | 0.236 | 2.06 | -- | -- | -- | -0.193 | 14 | -- | -- | -- | -- |
| 247.55 | 0.733 | 9 | -0.453 | -- | -2.72 | -- | -- | -0.744 | -- | 30.1 | 2 | -- | -- |
| 128.9 | 0.529 | 8.91 | -- | 1.74 | -1 | -- | -- | -0.4 | 14 | 28.53 | 5 | -- | -- |
| 398.77 | 0.933 | 8.88 | 0.15 | -- | -- | -- | -- | -0.241 | -- | -- | -- | -- | -- |
| 144.53 | 0.562 | 8.87 | -- | 2.06 | -- | -- | -- | -0.219 | 14 | -- | -- | -- | -- |
| 252.67 | 0.743 | 8.98 | -- | -- | -2.6 | -- | -- | -0.672 | -- | 30.1 | 2 | -- | -- |
| 399.36 | 0.933 | 8.89 | -- | -- | -- | -- | -- | -0.257 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.59 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 21 |
| 3 | 105.73 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 6 | 19 |
| 11 | 107.56 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 23 | 108.88 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 26 | 109.13 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 13 |
| 27 | 109.17 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 22 | 5 |
| 37 | 109.68 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 20 |
| 48 | 110.27 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 23 | 3 |
| 66 | 110.79 | temperature | 30.0 | 270 | < th | dose independent | rect. | 14 | 14 |
| 71 | 110.97 | humidity | 50.0 | 270 | > th | dose independent | rect. | 15 | 13 |
| 84 | 111.40 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 24 | 3 |
| 86 | 111.52 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 19 |
| 88 | 111.54 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 2 |
| 99 | 111.72 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 23 |
| 100 | 111.72 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 119 | 112.16 | humidity | 70.0 | 90 | > th | dose independent | rect. | 15 | 15 |
| 125 | 112.26 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 17 | 13 |
| 133 | 112.39 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 14 | 16 |
| 134 | 112.39 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 18 |
| 138 | 112.49 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 20 | 4 |
| 142 | 112.59 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 4 |
| 171 | 112.99 | humidity | 70.0 | 90 | > th | dose independent | rect. | 17 | 13 |
| 180 | 113.12 | temperature | 20.0 | 90 | > th | dose independent | rect. | 23 | 2 |
| 186 | 113.16 | temperature | 30.0 | 270 | < th | dose independent | rect. | 11 | 8 |
| 187 | 113.16 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 22 |
| 189 | 113.18 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 10 |
| 206 | 113.40 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 20 |
| 209 | 113.44 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 18 |
| 230 | 113.81 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 4 |
| 239 | 113.87 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 1 | 22 |
| 243 | 113.90 | humidity | 60.0 | 270 | > th | dose independent | rect. | 24 | 19 |
| 247 | 113.92 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 21 |
| 250 | 113.93 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 251 | 113.94 | temperature | 20.0 | 90 | > th | dose independent | rect. | 5 | 21 |
| 252 | 113.98 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 13 | 3 |
| 261 | 114.04 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 21 |
| 268 | 114.12 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 2 | 17 |
| 293 | 114.32 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 2 | 19 |
| 296 | 114.35 | temperature | 30.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 304 | 114.39 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 4 |
| 317 | 114.48 | temperature | 25.0 | 270 | < th | dose independent | rect. | 23 | 5 |
| 338 | 114.66 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 1 | 22 |
| 342 | 114.69 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 2 | 21 |
| 356 | 114.84 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 21 | 5 |
| 382 | 115.04 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 1 | 2 |
| 384 | 115.04 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 14 |
| 401 | 115.16 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 19 |
| 403 | 115.16 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 19 |
| 404 | 115.17 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 4 |
| 424 | 115.27 | temperature | 30.0 | 90 | < th | dose independent | rect. | 17 | 13 |
| 435 | 115.30 | humidity | 90.0 | 90 | < th | dose independent | rect. | 6 | 19 |
| 444 | 115.33 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 6 | 19 |
| 457 | 115.41 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 7 | 19 |
| 463 | 115.47 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 11 | 8 |
| 481 | 115.58 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 482 | 115.59 | radiation | 1.0 | 720 | < th | dose independent | rect. | 17 | 2 |
| 483 | 115.59 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 13 | 18 |
| 486 | 115.59 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 13 | 18 |
| 492 | 115.62 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 493 | 115.62 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 14 | 14 |
| 519 | 115.75 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 1 | 5 |
| 531 | 115.79 | temperature | 30.0 | 720 | > th | dose independent | rect. | 14 | 3 |
| 560 | 115.93 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 21 |
| 562 | 115.94 | radiation | 1.0 | 90 | < th | dose dependent | sin | 1 | NA |
| 570 | 115.98 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 2 | 5 |
| 574 | 116.00 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 1 | 3 |
| 585 | 116.02 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 13 |
| 589 | 116.03 | humidity | 60.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 591 | 116.03 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 598 | 116.07 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 21 |
| 638 | 116.18 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 3 |
| 664 | 116.26 | radiation | 1.0 | 720 | < th | dose independent | rect. | 17 | 11 |
| 670 | 116.28 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 10 |
| 677 | 116.29 | temperature | 25.0 | 30 | < th | dose independent | rect. | 24 | 20 |
| 678 | 116.29 | temperature | 30.0 | 10 | < th | dose dependent | sin | 7 | NA |
| 681 | 116.30 | temperature | 30.0 | 720 | > th | dose independent | rect. | 15 | 1 |
| 684 | 116.31 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 13 |
| 718 | 116.40 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 732 | 116.44 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 6 | 19 |
| 734 | 116.45 | radiation | 30.0 | 270 | < th | dose independent | rect. | 15 | 13 |
| 736 | 116.46 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 5 |
| 758 | 116.52 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 21 |
| 759 | 116.52 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 13 | 11 |
| 760 | 116.52 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 17 | 13 |
| 767 | 116.55 | temperature | 20.0 | 10 | > th | dose dependent | sin | 8 | NA |
| 768 | 116.55 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 10 |
| 771 | 116.56 | temperature | 25.0 | 30 | < th | dose independent | rect. | 24 | 6 |
| 790 | 116.62 | radiation | 1.0 | 90 | < th | dose independent | sin | 1 | NA |
| 800 | 116.64 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 826 | 116.70 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 863 | 116.77 | temperature | 30.0 | 720 | < th | dose independent | rect. | 8 | 20 |
| 892 | 116.81 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 2 |
| 895 | 116.81 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 2 |
| 899 | 116.81 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 2 |
| 901 | 116.81 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 2 |
| 906 | 116.81 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 22 |
| 907 | 116.81 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 2 |
| 915 | 116.82 | humidity | 50.0 | 720 | > th | dose independent | rect. | 16 | 4 |
| 921 | 116.83 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 2 |
| 925 | 116.83 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 23 | 10 |
| 934 | 116.85 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 2 |
| 936 | 116.85 | humidity | 50.0 | 720 | > th | dose independent | rect. | 16 | 21 |
| 937 | 116.85 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 2 |
| 957 | 116.90 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 17 | 11 |
| 978 | 116.95 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 23 | 2 |
| 996 | 117.01 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 2 |
| 997 | 117.01 | temperature | 20.0 | 10 | > th | dose independent | rect. | 21 | 5 |