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Os01g0978100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cysteine synthase, mitochondrial precursor (EC 2.5.1.47) (O- acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase C) (CS-C) (OAS-TL C) (AtCS-C).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.39 | 0.222 | 13.7 | -0.776 | 0.706 | 0.056 | 0.668 | 3.4 | -0.313 | 3.53 | 29.54 | 1731 | -- | -- |
| 24.07 | 0.229 | 13.8 | -1.48 | 0.696 | 0.41 | 0.671 | -- | -0.422 | 3.5 | 29.7 | 4634 | -- | -- |
| 23.76 | 0.227 | 13.7 | -0.8 | 0.71 | 0.0674 | -- | 3.35 | -0.317 | 3.54 | 29.54 | 1725 | -- | -- |
| 25 | 0.233 | 13.8 | -1.51 | 0.679 | 0.398 | -- | -- | -0.453 | 3.55 | 29.23 | 5513 | -- | -- |
| 48.1 | 0.323 | 13.8 | -0.693 | -- | 0.166 | -- | 2.9 | -0.286 | -- | 29 | 2685 | -- | -- |
| 30.63 | 0.259 | 13.8 | -1.37 | 0.713 | -- | 0.661 | -- | -0.445 | 3.41 | -- | -- | -- | -- |
| 32 | 0.265 | 13.8 | -1.38 | 0.717 | -- | -- | -- | -0.449 | 3.46 | -- | -- | -- | -- |
| 50.16 | 0.33 | 13.9 | -1.47 | -- | 0.516 | -- | -- | -0.509 | -- | 27.9 | 2671 | -- | -- |
| 81.17 | 0.42 | 13.8 | -- | 0.683 | 0.171 | -- | -- | -0.256 | 3.53 | 30.7 | 4536 | -- | -- |
| 60.81 | 0.364 | 13.8 | -1.35 | -- | -- | -- | -- | -0.43 | -- | -- | -- | -- | -- |
| 82.24 | 0.424 | 13.8 | -- | 0.69 | -- | -- | -- | -0.295 | 3.47 | -- | -- | -- | -- |
| 98.2 | 0.463 | 13.8 | -- | -- | -0.365 | -- | -- | -0.277 | -- | 27.9 | 2671 | -- | -- |
| 108.92 | 0.487 | 13.8 | -- | -- | -- | -- | -- | -0.28 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.08 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 12 | 2 |
| 3 | 23.09 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 7 | 23.16 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 9 | 23.17 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 11 | 7 |
| 10 | 23.17 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 11 | 7 |
| 12 | 23.18 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 13 | 23.18 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 16 | 23.18 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 25 | 23.22 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 31 | 23.22 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 10 |
| 33 | 23.22 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 16 |
| 44 | 23.23 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 13 |
| 51 | 23.23 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 16 | 14 |
| 61 | 23.24 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 9 |
| 64 | 23.24 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 11 |
| 66 | 23.24 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 14 |
| 72 | 23.24 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 20 |
| 88 | 23.25 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 89 | 23.25 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 17 | 8 |
| 93 | 23.26 | temperature | 30.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 114 | 23.26 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 4 |
| 115 | 23.26 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 17 | 6 |
| 136 | 23.27 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 17 |
| 145 | 23.28 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 163 | 23.28 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 164 | 23.28 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 181 | 23.29 | temperature | 30.0 | 1440 | > th | dose independent | sin | 1 | NA |
| 229 | 23.29 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 251 | 23.31 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 10 | 13 |
| 259 | 23.31 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 10 | 19 |
| 321 | 23.32 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 364 | 23.34 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 15 | 3 |
| 406 | 23.35 | radiation | 10.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 408 | 23.36 | temperature | 30.0 | 1440 | > th | dose independent | no | NA | NA |
| 409 | 23.36 | temperature | 30.0 | 1440 | < th | dose independent | no | NA | NA |
| 410 | 23.36 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 15 | 3 |
| 656 | 23.39 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 693 | 23.40 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 18 | 5 |
| 706 | 23.41 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 735 | 23.42 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 772 | 23.43 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 773 | 23.43 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 780 | 23.44 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 798 | 23.44 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 21 |
| 819 | 23.44 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 17 | 18 |
| 820 | 23.45 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 821 | 23.45 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 836 | 23.45 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 21 |
| 849 | 23.45 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 17 | 20 |
| 894 | 23.47 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 896 | 23.47 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 927 | 23.47 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 930 | 23.47 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 933 | 23.47 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 10 | 4 |
