Os01g0977600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Armadillo-like helical domain containing protein.
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Os01g0977600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Armadillo-like helical domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.65 | 0.192 | 9.07 | 1.46 | 0.127 | 0.156 | 0.0664 | -0.961 | 0.457 | 8.47 | 24.1 | 473 | -- | -- |
| 18.45 | 0.2 | 9.11 | 1.1 | 0.18 | 0.141 | -0.311 | -- | 0.326 | 7.46 | 27.89 | 1155 | -- | -- |
| 16.66 | 0.19 | 9.07 | 1.45 | 0.127 | 0.154 | -- | -0.937 | 0.454 | 8.36 | 24.1 | 469 | -- | -- |
| 18.69 | 0.201 | 9.11 | 1.12 | 0.162 | 0.168 | -- | -- | 0.339 | 7.43 | 27.8 | 1139 | -- | -- |
| 17.43 | 0.194 | 9.07 | 1.46 | -- | 0.196 | -- | -1 | 0.47 | -- | 24.2 | 485 | -- | -- |
| 19.47 | 0.207 | 9.12 | 1.07 | 0.177 | -- | -0.313 | -- | 0.302 | 7.5 | -- | -- | -- | -- |
| 19.68 | 0.208 | 9.12 | 1.06 | 0.177 | -- | -- | -- | 0.304 | 8.17 | -- | -- | -- | -- |
| 19.34 | 0.205 | 9.12 | 1.12 | -- | 0.238 | -- | -- | 0.332 | -- | 27.87 | 702 | -- | -- |
| 48.7 | 0.327 | 9.15 | -- | 0.212 | -0.104 | -- | -- | 0.17 | 6.45 | 27.02 | 125 | -- | -- |
| 21.4 | 0.216 | 9.12 | 1.06 | -- | -- | -- | -- | 0.306 | -- | -- | -- | -- | -- |
| 49.39 | 0.329 | 9.14 | -- | 0.184 | -- | -- | -- | 0.185 | 7.75 | -- | -- | -- | -- |
| 49.27 | 0.327 | 9.16 | -- | -- | -0.176 | -- | -- | 0.196 | -- | 24.3 | 2996 | -- | -- |
| 51.21 | 0.334 | 9.15 | -- | -- | -- | -- | -- | 0.188 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.05 | wind | 1.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 2 | 16.11 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 3 | 16.21 | wind | 1.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 4 | 16.22 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 5 | 16.26 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 7 | 16.28 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 9 | 16.28 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 15 | 4 |
| 27 | 16.30 | wind | 3.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 40 | 16.31 | atmosphere | 1005.0 | 43200 | < th | dose dependent | sin | 20 | NA |
| 77 | 16.33 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 99 | 16.34 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 122 | 16.35 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 170 | 16.37 | atmosphere | 1005.0 | 43200 | < th | dose dependent | no | NA | NA |
| 185 | 16.37 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 13 | 22 |
| 211 | 16.38 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 15 | 20 |
| 284 | 16.41 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 311 | 16.42 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 22 | 2 |
| 312 | 16.42 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 338 | 16.43 | wind | 1.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 339 | 16.43 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 341 | 16.43 | atmosphere | 1005.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 343 | 16.43 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 16 | 3 |
| 355 | 16.43 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 2 | 8 |
| 436 | 16.46 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 18 | 8 |
| 472 | 16.47 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 501 | 16.48 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 523 | 16.49 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 524 | 16.49 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 19 | 7 |
| 578 | 16.51 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 615 | 16.52 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 23 | 3 |
| 649 | 16.53 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 652 | 16.53 | wind | 3.0 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 657 | 16.53 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 724 | 16.54 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 744 | 16.55 | atmosphere | 1000.0 | 43200 | > th | dose independent | sin | 12 | NA |
| 747 | 16.55 | atmosphere | 1000.0 | 43200 | < th | dose independent | sin | 12 | NA |
| 870 | 16.58 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 22 | 2 |
| 908 | 16.59 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 971 | 16.60 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 998 | 16.61 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 14 | 12 |