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Os01g0977200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Heat shock protein DnaJ, N-terminal domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.6 (0.0137) R2 : 0.717
β1 : -1.07 (0.0501) R2dD : 0.294 R2D : 0.248
β2 : 0.955 (0.0353) R2dC : 0.454 R2C : 0.427
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.16 (0.0292) R2dN8 : 0.0249 R2N8 : -0.0153
σ : 0.257
deviance : 30.16
__
_____
C
peak time of C : 4.77
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.63 0.247 11.6 -1.04 0.287 -1.01 -0.378 -0.304 -0.123 1.69 1.51 729 -- --
27.7 0.245 11.6 -1.01 0.246 -1.09 -0.299 -- -0.119 0.627 1.541 722 -- --
28.09 0.247 11.6 -1.02 0.292 -1 -- -0.0708 -0.121 1.65 1.541 730 -- --
28.1 0.247 11.6 -1.02 0.295 -0.995 -- -- -0.119 1.78 1.54 730 -- --
28.92 0.25 11.5 -1.03 -- -1.04 -- 0.133 -0.112 -- 1.506 623 -- --
30.16 0.257 11.6 -1.07 0.955 -- -0.0176 -- -0.16 4.76 -- -- -- --
30.16 0.257 11.6 -1.07 0.955 -- -- -- -0.16 4.77 -- -- -- --
28.91 0.25 11.6 -1.01 -- -1.06 -- -- -0.11 -- 1.32 623 -- --
53.96 0.342 11.6 -- 0.355 -1.04 -- -- -0.0307 1.77 0.0009292 793 -- --
78.45 0.414 11.6 -1.04 -- -- -- -- -0.135 -- -- -- -- --
60.39 0.364 11.5 -- 0.936 -- -- -- -0.0405 4.8 -- -- -- --
54.12 0.343 11.5 -- -- -1.13 -- -- -0.0348 -- 5.182e-06 639 -- --
106.71 0.482 11.5 -- -- -- -- -- -0.0201 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 26.72 precipitation 0.1 4320 > th dose independent rect. 5 2
2 26.72 precipitation 0.1 4320 > th dose dependent rect. 5 2
3 26.75 precipitation 0.1 4320 > th dose dependent rect. 5 4
5 26.77 precipitation 0.1 4320 > th dose independent rect. 5 4
7 26.81 precipitation 0.1 4320 < th dose independent rect. 5 1
8 26.81 precipitation 0.1 4320 < th dose dependent rect. 5 1
15 26.91 wind 1.0 720 > th dose independent rect. 7 18
17 26.93 precipitation 0.1 4320 < th dose independent rect. 5 4
18 26.93 precipitation 0.1 4320 < th dose dependent rect. 5 4
26 27.00 wind 1.0 720 > th dose independent rect. 13 6
27 27.00 wind 1.0 720 > th dose independent rect. 15 10
42 27.05 humidity 70.0 270 > th dose independent rect. 17 13
52 27.10 precipitation 0.1 4320 > th dose dependent rect. 18 1
55 27.12 precipitation 0.1 4320 < th dose independent rect. 18 1
56 27.12 precipitation 0.1 4320 < th dose dependent rect. 18 1
57 27.13 precipitation 0.1 4320 > th dose independent rect. 18 1
59 27.13 precipitation 0.1 4320 < th dose independent rect. 4 8
65 27.13 precipitation 0.1 4320 < th dose dependent rect. 4 8
68 27.14 humidity 50.0 270 > th dose dependent rect. 16 14
69 27.14 radiation 1.0 270 < th dose dependent rect. 1 21
73 27.15 precipitation 0.1 1440 > th dose dependent rect. 18 7
77 27.18 humidity 50.0 720 > th dose independent rect. 10 20
83 27.20 precipitation 0.1 1440 > th dose independent rect. 18 7
86 27.21 wind 1.0 720 > th dose independent rect. 13 12
88 27.23 humidity 90.0 4320 > th dose independent rect. 13 1
90 27.23 temperature 30.0 270 < th dose independent rect. 17 13
97 27.25 humidity 50.0 720 > th dose independent rect. 1 21
105 27.27 humidity 50.0 720 > th dose independent rect. 10 12
108 27.28 wind 1.0 720 > th dose independent rect. 13 14
109 27.28 humidity 50.0 720 > th dose independent rect. 3 19
116 27.30 temperature 25.0 720 < th dose independent rect. 18 8
118 27.30 precipitation 0.1 720 < th dose independent rect. 15 18
119 27.30 radiation 1.0 270 < th dose independent rect. 1 21
121 27.30 precipitation 0.1 720 < th dose dependent rect. 15 18
122 27.31 temperature 25.0 720 < th dose independent rect. 16 11
130 27.34 humidity 50.0 270 > th dose independent rect. 11 10
133 27.34 radiation 1.0 720 > th dose independent rect. 13 23
136 27.35 humidity 50.0 720 > th dose independent rect. 3 10
139 27.36 wind 9.0 720 < th dose independent rect. 15 10
146 27.37 wind 9.0 720 < th dose independent rect. 13 14
153 27.38 radiation 1.0 720 < th dose independent rect. 1 23
154 27.39 precipitation 0.1 720 < th dose independent rect. 15 10
157 27.39 precipitation 0.1 720 < th dose dependent rect. 15 10
162 27.40 radiation 1.0 270 < th dose dependent rect. 23 23
163 27.41 wind 1.0 4320 > th dose independent rect. 18 2
167 27.41 radiation 1.0 720 > th dose independent rect. 6 12
169 27.42 precipitation 0.1 4320 > th dose independent rect. 4 13
172 27.42 temperature 25.0 270 > th dose dependent rect. 22 3
174 27.43 temperature 10.0 720 > th dose independent rect. 3 10
175 27.43 atmosphere 995.0 720 > th dose independent rect. 3 10
176 27.43 temperature 10.0 720 > th dose independent rect. 13 14
181 27.44 precipitation 0.1 720 < th dose independent rect. 13 14
183 27.44 precipitation 0.1 720 < th dose dependent rect. 13 14
185 27.45 temperature 25.0 720 < th dose independent rect. 18 4
186 27.45 temperature 10.0 720 > th dose independent rect. 15 10
188 27.45 temperature 10.0 720 > th dose independent rect. 1 14
190 27.46 temperature 25.0 270 > th dose independent rect. 22 3
193 27.46 radiation 1.0 270 < th dose independent rect. 23 23
195 27.47 precipitation 0.1 4320 < th dose independent rect. 3 14
197 27.47 wind 1.0 1440 < th dose dependent rect. 18 1
198 27.47 precipitation 0.1 4320 > th dose dependent rect. 3 14
199 27.47 precipitation 0.1 4320 < th dose dependent rect. 3 14
200 27.48 wind 1.0 720 > th dose independent rect. 23 2
204 27.48 humidity 50.0 720 > th dose independent rect. 1 14
209 27.49 precipitation 0.1 1440 < th dose independent rect. 18 8
213 27.49 precipitation 0.1 1440 < th dose dependent rect. 18 8
221 27.50 precipitation 0.1 4320 > th dose independent rect. 3 17
223 27.50 radiation 1.0 720 > th dose independent rect. 6 23
224 27.50 precipitation 0.1 4320 > th dose dependent rect. 16 1
225 27.50 precipitation 0.1 4320 > th dose dependent rect. 14 3
238 27.51 humidity 50.0 720 > th dose independent rect. 16 23
239 27.52 wind 7.0 720 < th dose independent rect. 13 5
242 27.52 precipitation 0.1 4320 < th dose independent rect. 3 17
244 27.52 precipitation 0.1 4320 < th dose dependent rect. 3 17
253 27.54 temperature 25.0 720 < th dose independent sin 15 NA
266 27.55 humidity 90.0 1440 > th dose dependent rect. 19 1
272 27.56 radiation 1.0 4320 > th dose independent rect. 6 2
273 27.56 radiation 1.0 4320 < th dose independent rect. 6 2
276 27.56 radiation 40.0 720 < th dose independent rect. 15 10
281 27.57 wind 1.0 4320 < th dose independent rect. 18 1
284 27.57 humidity 80.0 1440 < th dose independent rect. 11 2
292 27.58 radiation 1.0 720 < th dose independent rect. 7 15
303 27.59 precipitation 0.1 720 < th dose independent rect. 23 18
306 27.59 atmosphere 1005.0 10 > th dose dependent rect. 24 3
309 27.59 precipitation 0.1 720 < th dose dependent rect. 23 18
319 27.60 precipitation 0.1 4320 > th dose independent rect. 1 19
337 27.61 humidity 90.0 4320 > th dose dependent rect. 7 1
340 27.61 radiation 1.0 720 < th dose dependent rect. 14 8
356 27.62 precipitation 0.1 4320 < th dose independent rect. 1 19
365 27.62 precipitation 0.1 4320 < th dose dependent rect. 1 19
374 27.63 humidity 90.0 720 > th dose dependent sin 22 NA
375 27.63 radiation 1.0 720 < th dose dependent rect. 16 6
379 27.64 humidity 80.0 14400 > th dose independent rect. 6 1
380 27.64 wind 7.0 720 < th dose independent rect. 15 3
396 27.64 humidity 90.0 720 > th dose dependent rect. 5 17
404 27.65 atmosphere 1015.0 720 < th dose independent rect. 3 10
413 27.66 precipitation 0.1 4320 > th dose independent sin 2 NA
420 27.66 wind 1.0 1440 > th dose independent rect. 8 11
429 27.67 temperature 25.0 270 < th dose independent sin 11 NA
430 27.67 humidity 50.0 720 > th dose independent rect. 10 5
433 27.67 radiation 1.0 720 < th dose independent rect. 16 6
439 27.67 radiation 1.0 720 < th dose dependent rect. 7 15
447 27.68 wind 9.0 720 < th dose independent rect. 3 10
453 27.68 radiation 1.0 720 < th dose independent rect. 7 22
455 27.68 wind 3.0 1440 < th dose dependent rect. 8 5
461 27.69 precipitation 0.1 4320 < th dose independent sin 2 NA
469 27.69 precipitation 0.1 4320 < th dose dependent sin 2 NA
470 27.69 humidity 90.0 14400 > th dose dependent rect. 18 1
474 27.69 humidity 90.0 4320 > th dose dependent rect. 7 7
476 27.69 humidity 90.0 720 > th dose dependent rect. 7 14
478 27.70 precipitation 0.1 4320 > th dose independent rect. 7 2
483 27.70 radiation 1.0 720 < th dose independent rect. 14 8
488 27.70 precipitation 0.1 4320 > th dose dependent rect. 7 2
494 27.70 radiation 10.0 270 < th dose dependent rect. 17 14
508 27.71 radiation 1.0 270 > th dose independent rect. 15 23
519 27.72 precipitation 0.1 720 < th dose independent rect. 13 23
522 27.72 atmosphere 1015.0 270 < th dose dependent rect. 17 13
525 27.72 radiation 1.0 720 < th dose dependent rect. 7 22
526 27.72 precipitation 0.1 720 < th dose dependent rect. 13 23
527 27.73 radiation 1.0 720 > th dose independent rect. 13 5
540 27.74 precipitation 0.1 720 < th dose independent rect. 23 10
543 27.74 precipitation 0.1 720 < th dose independent rect. 22 20
548 27.74 precipitation 0.1 720 < th dose dependent rect. 23 10
551 27.74 atmosphere 1015.0 90 < th dose dependent rect. 19 12
552 27.74 temperature 10.0 30 > th dose dependent rect. 22 14
558 27.74 precipitation 0.1 720 < th dose dependent rect. 22 20
565 27.75 wind 1.0 1440 < th dose independent rect. 8 11
583 27.76 precipitation 0.1 720 < th dose independent rect. 13 6
588 27.76 precipitation 0.1 720 < th dose independent rect. 6 19
591 27.76 precipitation 0.1 720 < th dose dependent rect. 13 6
593 27.76 temperature 10.0 10 > th dose dependent rect. 24 12
596 27.76 precipitation 0.1 720 < th dose dependent rect. 6 19
618 27.78 humidity 80.0 14400 < th dose independent rect. 6 1
676 27.80 precipitation 0.1 4320 > th dose dependent rect. 3 17
680 27.81 precipitation 0.1 4320 < th dose independent rect. 7 2
690 27.81 humidity 90.0 90 < th dose independent rect. 24 12
701 27.81 precipitation 0.1 4320 < th dose dependent rect. 7 2
713 27.82 temperature 15.0 270 > th dose independent rect. 17 13
722 27.83 precipitation 0.1 4320 > th dose independent rect. 14 3
723 27.83 precipitation 0.1 4320 > th dose independent rect. 14 6
724 27.83 precipitation 0.1 4320 < th dose independent rect. 14 6
725 27.83 precipitation 0.1 270 < th dose independent rect. 21 13
729 27.83 humidity 50.0 720 > th dose independent rect. 19 18
731 27.83 humidity 90.0 4320 > th dose dependent rect. 13 1
735 27.83 precipitation 0.1 4320 < th dose dependent rect. 14 6
739 27.83 radiation 1.0 720 < th dose dependent rect. 9 13
741 27.83 precipitation 0.1 270 < th dose dependent rect. 21 13
744 27.83 precipitation 0.1 4320 > th dose dependent rect. 1 19
752 27.84 radiation 1.0 720 < th dose independent rect. 17 12
754 27.84 radiation 1.0 720 > th dose independent rect. 13 16
757 27.84 radiation 1.0 270 > th dose independent rect. 18 23
760 27.84 radiation 40.0 720 < th dose dependent rect. 1 6
771 27.85 wind 3.0 1440 < th dose independent rect. 10 3
773 27.85 atmosphere 995.0 270 > th dose independent rect. 6 11
775 27.85 radiation 1.0 720 < th dose independent rect. 3 14
781 27.85 radiation 1.0 4320 < th dose dependent rect. 6 2
822 27.86 precipitation 0.1 4320 > th dose dependent sin 3 NA
837 27.87 wind 1.0 14400 > th dose independent rect. 1 1
838 27.87 wind 1.0 14400 < th dose independent rect. 1 1
850 27.87 wind 9.0 720 < th dose independent rect. 1 14
864 27.88 precipitation 0.1 4320 < th dose independent rect. 14 3
879 27.88 precipitation 0.1 4320 < th dose dependent rect. 14 3
886 27.89 radiation 1.0 270 > th dose independent sin 2 NA
893 27.89 precipitation 0.1 4320 > th dose independent rect. 10 10
897 27.89 radiation 1.0 720 < th dose independent rect. 9 13
905 27.89 radiation 1.0 270 < th dose independent rect. 14 19
910 27.89 humidity 90.0 14400 < th dose dependent rect. 3 1
933 27.90 precipitation 0.1 4320 < th dose independent rect. 10 10
938 27.90 radiation 1.0 720 > th dose independent rect. 4 14
951 27.90 precipitation 0.1 720 < th dose independent rect. 6 21
969 27.90 precipitation 0.1 4320 < th dose dependent rect. 10 10
975 27.90 precipitation 0.1 720 < th dose dependent rect. 6 21
977 27.91 wind 3.0 1440 > th dose independent rect. 10 3
985 27.91 wind 9.0 270 < th dose independent rect. 6 11
995 27.91 radiation 1.0 720 > th dose independent rect. 11 23